------------------------------------------------------------------------ r21931 | NBabkovskaia | 2014-07-05 13:57:34 +0200 (Sat, 05 Jul 2014) | 3 lines minors (copy of norosx52) ------------------------------------------------------------------------ r21930 | NBabkovskaia | 2014-07-05 12:46:44 +0200 (Sat, 05 Jul 2014) | 4 lines added PP_aver ------------------------------------------------------------------------ r21928 | NBabkovskaia@gmail.com | 2014-07-04 13:10:44 +0200 (Fri, 04 Jul 2014) | 3 lines minor changes for lsubstep ------------------------------------------------------------------------ r21927 | NBabkovskaia@gmail.com | 2014-07-03 19:15:43 +0200 (Thu, 03 Jul 2014) | 3 lines added lsubstep option ------------------------------------------------------------------------ r21926 | Bourdin.KIS | 2014-07-03 17:44:16 +0200 (Thu, 03 Jul 2014) | 2 lines Made F95-compliant; now compiles with gfortran-4.8.2 in the default compiler configuration. ------------------------------------------------------------------------ r21924 | AxelBrandenburg | 2014-07-01 11:48:25 +0200 (Tue, 01 Jul 2014) | 1 line wrong comment marker ------------------------------------------------------------------------ r21922 | mreinhardt@nordita.org | 2014-06-30 20:33:56 +0200 (Mon, 30 Jun 2014) | 2 lines MR: removed ngridtot again as we have already nwgrid (also more safely implemented) for that purpose ------------------------------------------------------------------------ r21921 | NBabkovskaia@gmail.com | 2014-06-30 12:50:03 +0200 (Mon, 30 Jun 2014) | 9 lines 1) made option to add points to be interpolated 2) now the data points are interpolated (not fitted) 3) minors in dustdensity ------------------------------------------------------------------------ r21919 | ccyang@astro.lu.se | 2014-06-29 23:02:38 +0200 (Sun, 29 Jun 2014) | 2 lines Implement vertically-varying dynamical diffusion coefficients. ------------------------------------------------------------------------ r21918 | ccyang@astro.lu.se | 2014-06-29 21:46:50 +0200 (Sun, 29 Jun 2014) | 3 lines Add function find_xyrms_fvec to calculate the rms magnitude of a vector field in each z. ------------------------------------------------------------------------ r21917 | ccyang@astro.lu.se | 2014-06-29 16:55:32 +0200 (Sun, 29 Jun 2014) | 2 lines Add parameter ngridtot for total number of grid points. ------------------------------------------------------------------------ r21907 | wladimir.lyra | 2014-06-24 03:06:13 +0200 (Tue, 24 Jun 2014) | 3 lines Added framework for doing gravity at the reference frame of the star. ------------------------------------------------------------------------ r21906 | ccyang@astro.lu.se | 2014-06-23 18:14:45 +0200 (Mon, 23 Jun 2014) | 2 lines Avoid weird segmentation fault with Intel compilers. ------------------------------------------------------------------------ r21903 | mreinhardt@nordita.org | 2014-06-21 01:43:45 +0200 (Sat, 21 Jun 2014) | 2 lines MR: changes due to change of p%fcont ------------------------------------------------------------------------ r21902 | mreinhardt@nordita.org | 2014-06-21 01:43:09 +0200 (Sat, 21 Jun 2014) | 2 lines MR: changes due to change of p%fcont ------------------------------------------------------------------------ r21901 | mreinhardt@nordita.org | 2014-06-21 01:42:29 +0200 (Sat, 21 Jun 2014) | 2 lines MR: changes due to change of p%fcont ------------------------------------------------------------------------ r21900 | mreinhardt@nordita.org | 2014-06-21 01:41:51 +0200 (Sat, 21 Jun 2014) | 2 lines MR: changes due to change of p%fcont; TBDone comments added ------------------------------------------------------------------------ r21899 | AxelBrandenburg | 2014-06-20 07:11:27 +0200 (Fri, 20 Jun 2014) | 3 lines corrected forcing term by including (kx_ff**2*profz_ampl(n)-d2profz_ampl(n)) factor ------------------------------------------------------------------------ r21898 | ccyang@astro.lu.se | 2014-06-19 12:55:03 +0200 (Thu, 19 Jun 2014) | 2 lines Implement conservation of mass. ------------------------------------------------------------------------ r21897 | mreinhardt@nordita.org | 2014-06-19 11:39:28 +0200 (Thu, 19 Jun 2014) | 2 lines MR: broke a line to fix the autotest on norlx51b ------------------------------------------------------------------------ r21896 | mreinhardt@nordita.org | 2014-06-19 09:57:38 +0200 (Thu, 19 Jun 2014) | 2 lines MR: declaration of p%fcont changed ------------------------------------------------------------------------ r21895 | AxelBrandenburg | 2014-06-18 21:30:24 +0200 (Wed, 18 Jun 2014) | 2 lines added force to compensate Lorentz force ------------------------------------------------------------------------ r21894 | mreinhardt@nordita.org | 2014-06-18 19:45:42 +0200 (Wed, 18 Jun 2014) | 2 lines MR: changes for extension in continuous forcing ------------------------------------------------------------------------ r21893 | mreinhardt@nordita.org | 2014-06-18 19:37:03 +0200 (Wed, 18 Jun 2014) | 2 lines MR: changes for extension in continuous forcing ------------------------------------------------------------------------ r21892 | mreinhardt@nordita.org | 2014-06-18 19:24:02 +0200 (Wed, 18 Jun 2014) | 2 lines MR: new parameter n_forcing_cont ------------------------------------------------------------------------ r21891 | mreinhardt@nordita.org | 2014-06-18 19:23:04 +0200 (Wed, 18 Jun 2014) | 2 lines MR: changes for enabling two simultaneous forcings ------------------------------------------------------------------------ r21889 | Nbabkovskaia | 2014-06-18 16:24:25 +0200 (Wed, 18 Jun 2014) | 3 lines now the initialization of nd is here ------------------------------------------------------------------------ r21888 | Nbabkovskaia | 2014-06-18 16:23:26 +0200 (Wed, 18 Jun 2014) | 3 lines modifyed calculation of dndr ------------------------------------------------------------------------ r21887 | Nbabkovskaia | 2014-06-18 16:16:56 +0200 (Wed, 18 Jun 2014) | 3 lines moved initial cond. for nd to special ------------------------------------------------------------------------ r21886 | ccyang@astro.lu.se | 2014-06-18 13:03:12 +0200 (Wed, 18 Jun 2014) | 2 lines Implement gentle external magnetic field. ------------------------------------------------------------------------ r21883 | AxelBrandenburg | 2014-06-15 22:54:53 +0200 (Sun, 15 Jun 2014) | 2 lines added ugu(3); del2u(3) to PENCILS PROVIDED, to be able to run adection tests again ------------------------------------------------------------------------ r21881 | AxelBrandenburg | 2014-06-14 22:11:12 +0200 (Sat, 14 Jun 2014) | 3 lines general: spline_derivative_double made public dustdensity: added multiplicative kernel ------------------------------------------------------------------------ r21880 | Nbabkovskaia | 2014-06-12 16:28:31 +0200 (Thu, 12 Jun 2014) | 2 lines changed calculation of derivative for particle distributi$ ------------------------------------------------------------------------ r21879 | Nbabkovskaia | 2014-06-12 16:06:44 +0200 (Thu, 12 Jun 2014) | 3 lines minor changes in initial distr. for ACTOS particles ------------------------------------------------------------------------ r21876 | AxelBrandenburg | 2014-06-11 17:08:14 +0200 (Wed, 11 Jun 2014) | 2 lines replaced minimal nd value of 0 by ndmin_for_mdvar which is initialized by zero. ------------------------------------------------------------------------ r21875 | Nbabkovskaia | 2014-06-11 16:33:04 +0200 (Wed, 11 Jun 2014) | 2 lines minor ------------------------------------------------------------------------ r21874 | Nbabkovskaia | 2014-06-11 15:18:41 +0200 (Wed, 11 Jun 2014) | 2 lines added smoothing of the initial particle profile ------------------------------------------------------------------------ r21873 | ccyang@astro.lu.se | 2014-06-11 14:47:59 +0200 (Wed, 11 Jun 2014) | 2 lines Change the treatment of infinite beta. ------------------------------------------------------------------------ r21872 | Nbabkovskaia | 2014-06-11 12:41:22 +0200 (Wed, 11 Jun 2014) | 3 lines added ACTOS data for initial particle distr. ------------------------------------------------------------------------ r21870 | ccyang@astro.lu.se | 2014-06-10 17:25:29 +0200 (Tue, 10 Jun 2014) | 2 lines Add yz-averages b2mx, bxbzmx, and bybzmx. ------------------------------------------------------------------------ r21869 | joern.warnecke | 2014-06-10 17:20:57 +0200 (Tue, 10 Jun 2014) | 2 lines polish some bump in the transition from convection zone to corona ------------------------------------------------------------------------ r21868 | ccyang@astro.lu.se | 2014-06-10 17:02:06 +0200 (Tue, 10 Jun 2014) | 2 lines Add yz-averages betamx and beta2mx. ------------------------------------------------------------------------ r21867 | ccyang@astro.lu.se | 2014-06-10 16:49:34 +0200 (Tue, 10 Jun 2014) | 2 lines Add xy-averages betamz and beta2mz. ------------------------------------------------------------------------ r21866 | ccyang@astro.lu.se | 2014-06-10 16:30:12 +0200 (Tue, 10 Jun 2014) | 2 lines Add pencil betam and diagnostics betam, betamax, and betamin. ------------------------------------------------------------------------ r21862 | Nbabkovskaia | 2014-06-09 15:14:49 +0200 (Mon, 09 Jun 2014) | 2 lines new setting of ACTOS problem ------------------------------------------------------------------------ r21860 | palvi.b | 2014-06-09 10:17:47 +0200 (Mon, 09 Jun 2014) | 2 lines Now included corrections in Hminus Opacity with switch lHminus_opacity_correction ------------------------------------------------------------------------ r21859 | AxelBrandenburg | 2014-06-08 11:13:50 +0200 (Sun, 08 Jun 2014) | 3 lines minor correction in forcing, missing argument argument, and an addition to mean-field module. ------------------------------------------------------------------------ r21858 | AxelBrandenburg | 2014-06-08 10:44:27 +0200 (Sun, 08 Jun 2014) | 7 lines radiation_ray.f90: fixed (hopefully) auto-test; changed iFrad to iKR_Frad cdata.f90, radiation_ray.f90, noradiation.f90: changed iFrad to iKR_Frad forcing.f90: added modulation by profy_ampl to f=(0,cosx*cosz,0) profile eos_temperature_ionization.f90: allowed chiH and chiHminus to be modified dustdensity.f90: changed initial condition sinx to 1+sinx nomagnetic.f90: added dummy routine ------------------------------------------------------------------------ r21857 | ccyang@astro.lu.se | 2014-06-05 13:35:39 +0200 (Thu, 05 Jun 2014) | 2 lines Implement shear-dependent hyper-resistivity in bfield. ------------------------------------------------------------------------ r21856 | ccyang@astro.lu.se | 2014-06-05 13:33:48 +0200 (Thu, 05 Jun 2014) | 2 lines Make the indexing of df2 consistent in der2_pencil(). ------------------------------------------------------------------------ r21855 | AxelBrandenburg | 2014-06-04 16:14:00 +0200 (Wed, 04 Jun 2014) | 2 lines commented out if statement around some initial settings that were previously only executed when lcoagulation=T, but at least for testing purposes we want this to work also in general. ------------------------------------------------------------------------ r21854 | AxelBrandenburg | 2014-06-04 11:09:09 +0200 (Wed, 04 Jun 2014) | 2 lines betad(k) was outside a k do loop, which created garbage with some compilers ------------------------------------------------------------------------ r21847 | ccyang@astro.lu.se | 2014-06-03 00:42:59 +0200 (Tue, 03 Jun 2014) | 3 lines Implement hyper-diffusion in x-direction to damp aliasing in shearing sheets. ------------------------------------------------------------------------ r21845 | AxelBrandenburg | 2014-05-30 16:36:29 +0200 (Fri, 30 May 2014) | 2 lines added helicity surface in x, also with cosy modulation ------------------------------------------------------------------------ r21844 | ccyang@astro.lu.se | 2014-05-30 14:36:20 +0200 (Fri, 30 May 2014) | 4 lines 1. Add magnetic_before_boundary pre-processing facility. 2. Add parameter lbb_as_comaux in magnetic.f90 to make bb ready before boundary communications and pencil calculations. ------------------------------------------------------------------------ r21843 | ccyang@astro.lu.se | 2014-05-30 14:33:36 +0200 (Fri, 30 May 2014) | 2 lines Add optional argument communicated to subroutine register_report_aux. ------------------------------------------------------------------------ r21842 | ccyang@astro.lu.se | 2014-05-29 23:31:23 +0200 (Thu, 29 May 2014) | 2 lines Fix a missing pencil dependence. ------------------------------------------------------------------------ r21840 | AxelBrandenburg | 2014-05-28 10:09:16 +0200 (Wed, 28 May 2014) | 2 lines have cs2 also as optional auxiliary variable ------------------------------------------------------------------------ r21839 | AxelBrandenburg | 2014-05-27 10:52:00 +0200 (Tue, 27 May 2014) | 3 lines Added warning: ! Remember putting "! MAUX CONTRIBUTION 3" (or adding 3) in cparam.local! ------------------------------------------------------------------------ r21838 | AxelBrandenburg | 2014-05-27 10:48:39 +0200 (Tue, 27 May 2014) | 5 lines Now allocated auxiliary arrays for radiative flux only if lradflux=T. Note also that since r21362 (5 Dec 2013), Frad is the radiative flux *multiplied* by kappa*rho, not actually the radiative flux itself! We might want to consider thereforce changing its name. ------------------------------------------------------------------------ r21830 | AxelBrandenburg | 2014-05-21 18:08:26 +0200 (Wed, 21 May 2014) | 2 lines entropy and pressure as auxiliary variables: sss and ppp ------------------------------------------------------------------------ r21827 | AxelBrandenburg | 2014-05-21 16:29:57 +0200 (Wed, 21 May 2014) | 2 lines added lss_as_aux,lcv_as_aux,lgamma_as_aux ------------------------------------------------------------------------ r21824 | ccyang@astro.lu.se | 2014-05-19 22:30:24 +0200 (Mon, 19 May 2014) | 2 lines Scale eta_hyper3_mesh with dimensionality. ------------------------------------------------------------------------ r21822 | AxelBrandenburg | 2014-05-19 04:54:10 +0200 (Mon, 19 May 2014) | 7 lines param_io: additional pipe profiles eos_idealgas: just an additional comment added radiation_ray: added scalefactor_kappa (works currently only for Hminus opacity) hydro: allow for the possibility to correct for nonzero momentum density: allow specify density scale height for exponential stratification magnetic: added comment ------------------------------------------------------------------------ r21821 | ccyang@astro.lu.se | 2014-05-19 02:38:41 +0200 (Mon, 19 May 2014) | 2 lines Make subroutine get_density_z public. ------------------------------------------------------------------------ r21817 | AxelBrandenburg | 2014-05-17 11:40:47 +0200 (Sat, 17 May 2014) | 3 lines corrected systematic sign errors for the new cxcycz method and implemented calc_coeffc_z routine (analogously to calc_coeffs_z). ------------------------------------------------------------------------ r21815 | mreinhardt@nordita.org | 2014-05-17 03:23:06 +0200 (Sat, 17 May 2014) | 3 lines MR: bug fixed ------------------------------------------------------------------------ r21814 | mreinhardt@nordita.org | 2014-05-16 19:18:40 +0200 (Fri, 16 May 2014) | 2 lines MR: calculation of averages in testfield_after_boundary now based on pencils for compatibility with hydro_kinematic ------------------------------------------------------------------------ r21813 | AxelBrandenburg | 2014-05-16 19:15:44 +0200 (Fri, 16 May 2014) | 2 lines added method cxcycz ------------------------------------------------------------------------ r21812 | alexrichert | 2014-05-16 15:09:40 +0200 (Fri, 16 May 2014) | 2 lines Should work now that dummy subroutines for mpi_sendrecv are included. ------------------------------------------------------------------------ r21808 | palvi.b | 2014-05-15 22:46:22 +0200 (Thu, 15 May 2014) | 1 line corrected assignment of farr with constant yH ------------------------------------------------------------------------ r21805 | alexrichert | 2014-05-15 17:41:00 +0200 (Thu, 15 May 2014) | 2 lines Fixed a typo or two in comments; renamed variable that switches on pre-calculation of distances. ------------------------------------------------------------------------ r21798 | Nbabkovskaia | 2014-05-15 12:52:45 +0200 (Thu, 15 May 2014) | 3 lines minors (limit for particle data) ------------------------------------------------------------------------ r21796 | alexrichert | 2014-05-15 04:24:16 +0200 (Thu, 15 May 2014) | 2 lines Added general-purpose MPI_SEND_RECV subroutines for real scalars and arrays of dim 1-4 (used in experimental/barneshut.f90). ------------------------------------------------------------------------ r21795 | alexrichert | 2014-05-15 04:17:46 +0200 (Thu, 15 May 2014) | 2 lines Initial commits for config files and for tree gravity module for sph. coord's (work in progress). ------------------------------------------------------------------------ r21794 | Nbabkovskaia | 2014-05-14 12:26:46 +0200 (Wed, 14 May 2014) | 3 lines minor bugs ------------------------------------------------------------------------ r21790 | Nbabkovskaia | 2014-05-13 15:27:13 +0200 (Tue, 13 May 2014) | 3 lines changed ACTOS part ------------------------------------------------------------------------ r21789 | Nbabkovskaia | 2014-05-13 15:26:38 +0200 (Tue, 13 May 2014) | 3 lines modified aerosol model ------------------------------------------------------------------------ r21779 | Nbabkovskaia | 2014-05-12 17:12:46 +0200 (Mon, 12 May 2014) | 3 lines modified ACTOS part ------------------------------------------------------------------------ r21776 | nils.e.haugen | 2014-05-12 13:56:27 +0200 (Mon, 12 May 2014) | 2 lines Allow for reactions with only one product.....this may not be physical though. ------------------------------------------------------------------------ r21764 | mreinhardt@nordita.org | 2014-05-09 02:52:34 +0200 (Fri, 09 May 2014) | 2 lines MR: removed ie from cdata; not used, except being printed out in [no]radiation*.f90 ------------------------------------------------------------------------ r21763 | nishant.cosmo | 2014-05-08 20:09:49 +0200 (Thu, 08 May 2014) | 2 lines modified two-layer ------------------------------------------------------------------------ r21762 | nishant.cosmo | 2014-05-08 20:05:17 +0200 (Thu, 08 May 2014) | 2 lines added two-layer setup ------------------------------------------------------------------------ r21761 | AxelBrandenburg | 2014-05-08 19:42:26 +0200 (Thu, 08 May 2014) | 3 lines Matthias, please check that the new name for ie (=iend_zrange) is a good one. "ie" was a possible index of the f array and was interpreted by idl wrongly. ------------------------------------------------------------------------ r21760 | palvi.b | 2014-05-08 18:27:11 +0200 (Thu, 08 May 2014) | 1 line removed spurious factor 2 in blob amplitude ------------------------------------------------------------------------ r21747 | AxelBrandenburg | 2014-05-07 19:32:52 +0200 (Wed, 07 May 2014) | 3 lines +! transposing output, as in Fourier_transform_xy; an unreverted transposition is performed +! but no transposition when nygrid=1 (e.g., in 2-D setup for 1-D spectrum) ------------------------------------------------------------------------ r21746 | AxelBrandenburg | 2014-05-07 18:18:09 +0200 (Wed, 07 May 2014) | 2 lines reverted mpicomm to r21711 (consulting with Matthias) and corrected ivec bug in power_spectrum ------------------------------------------------------------------------ r21745 | mreinhardt@nordita.org | 2014-05-07 17:17:43 +0200 (Wed, 07 May 2014) | 2 lines MR: fix to calm a compiler ------------------------------------------------------------------------ r21739 | Bourdin.KIS | 2014-05-07 15:46:56 +0200 (Wed, 07 May 2014) | 2 lines Corrected for F95 standard. ------------------------------------------------------------------------ r21731 | ccyang@astro.lu.se | 2014-05-06 12:27:00 +0200 (Tue, 06 May 2014) | 2 lines Fix svn id. ------------------------------------------------------------------------ r21730 | anders.johansen.astro@gmail.com | 2014-05-06 11:14:55 +0200 (Tue, 06 May 2014) | 2 lines Implemented logarithmic particle size. ------------------------------------------------------------------------ r21729 | anders.johansen.astro@gmail.com | 2014-05-06 11:14:26 +0200 (Tue, 06 May 2014) | 2 lines Implemented friction time proportional to inverse particle radius. ------------------------------------------------------------------------ r21728 | boris.dintrans | 2014-05-06 11:13:48 +0200 (Tue, 06 May 2014) | 4 lines Thank to the punctilious g95 compiler for pinpointing this double "+" (ifort did not complain about) ------------------------------------------------------------------------ r21726 | mreinhardt@nordita.org | 2014-05-05 19:43:07 +0200 (Mon, 05 May 2014) | 2 lines MR: modifications for request of spectrum of individual components of a vector field ------------------------------------------------------------------------ r21725 | ccyang@astro.lu.se | 2014-05-05 13:39:25 +0200 (Mon, 05 May 2014) | 2 lines Only print warning in the heading information. ------------------------------------------------------------------------ r21724 | ccyang@astro.lu.se | 2014-05-05 13:29:16 +0200 (Mon, 05 May 2014) | 2 lines Implement a simple version of shock diffusion. ------------------------------------------------------------------------ r21723 | anders.johansen.astro@gmail.com | 2014-05-04 20:49:27 +0200 (Sun, 04 May 2014) | 4 lines No need to complain about drag force not being implemented for variable particle radius or number if particle mass is used. ------------------------------------------------------------------------ r21722 | ccyang@astro.lu.se | 2014-05-04 01:12:05 +0200 (Sun, 04 May 2014) | 2 lines Wrongly checked in a link. Here is the file. ------------------------------------------------------------------------ r21721 | ccyang@astro.lu.se | 2014-05-03 21:53:59 +0200 (Sat, 03 May 2014) | 2 lines Implement continuity equation with balanced density stratification. ------------------------------------------------------------------------ r21719 | AxelBrandenburg | 2014-05-02 20:16:44 +0200 (Fri, 02 May 2014) | 4 lines param_io.f90, cdata.f90, grid.f90: added pipecoords (pipe coordinate) equ.f90: now call get_grid_mn for all non-Cartesian coordinates sub.f90: added pipe coordinates (at least for 1-D) in div operator ------------------------------------------------------------------------ r21718 | boris.dintrans | 2014-05-02 15:09:53 +0200 (Fri, 02 May 2014) | 5 lines - added the superposed layers case to study the thermo-acoustic instability in polytropes - began the 3D version of the ADI scheme ------------------------------------------------------------------------ r21717 | Bourdin.KIS | 2014-05-02 12:05:40 +0200 (Fri, 02 May 2014) | 2 lines Applying the same change as r21502 to the other tools in this folder (rparam => read_startpars), as becomes necessary by r21264. ------------------------------------------------------------------------ r21715 | Bourdin.KIS@googlemail.com | 2014-05-02 00:17:02 +0200 (Fri, 02 May 2014) | 2 lines Ginging a proper filename for the output and append the data instead of overwriting it on each run. ------------------------------------------------------------------------ r21711 | Bourdin.KIS@googlemail.com | 2014-04-30 10:05:52 +0200 (Wed, 30 Apr 2014) | 2 lines Wow, error by one - but I understand, why it obviously affected noone. ------------------------------------------------------------------------ r21710 | ccyang@astro.lu.se | 2014-04-29 20:53:26 +0200 (Tue, 29 Apr 2014) | 2 lines Change the label of an if statement to avoid name conflict. ------------------------------------------------------------------------ r21709 | mreinhardt@nordita.org | 2014-04-29 17:08:47 +0200 (Tue, 29 Apr 2014) | 2 lines MR: fixed a bug in Eampxy calc; coded calc of uufluct according to spectral filtering; introd switch lcalc_umean, default: true; removed unneeded quantities ------------------------------------------------------------------------ r21708 | ccyang@astro.lu.se | 2014-04-29 13:55:30 +0200 (Tue, 29 Apr 2014) | 3 lines Introduce a shear dependent term for dynamical hyper-diffusion to control the aliased power of shearing waves. ------------------------------------------------------------------------ r21707 | mreinhardt@nordita.org | 2014-04-29 13:36:04 +0200 (Tue, 29 Apr 2014) | 2 lines MR: calculation of uxbtest' now according to spectral filtering ------------------------------------------------------------------------ r21706 | nils.e.haugen | 2014-04-28 13:19:00 +0200 (Mon, 28 Apr 2014) | 2 lines pencil tcond is now provided ------------------------------------------------------------------------ r21705 | pkapyla | 2014-04-28 11:53:48 +0200 (Mon, 28 Apr 2014) | 2 lines Final dummy routines to fix auto-tests. ------------------------------------------------------------------------ r21704 | nishant.cosmo | 2014-04-28 11:05:48 +0200 (Mon, 28 Apr 2014) | 2 lines added inz to compute power in x-direction at a specific z location chosen by integer variable inz ------------------------------------------------------------------------ r21703 | AxelBrandenburg | 2014-04-25 14:28:12 +0200 (Fri, 25 Apr 2014) | 2 lines added cosx*cosz forcing ------------------------------------------------------------------------ r21702 | pkapyla | 2014-04-25 10:28:20 +0200 (Fri, 25 Apr 2014) | 2 lines Added dummy routines to calm the auto-test. ------------------------------------------------------------------------ r21701 | AxelBrandenburg | 2014-04-25 09:06:45 +0200 (Fri, 25 Apr 2014) | 2 lines control the passive scalar jump using cc_left and cc_right as input parameters in case ('jump-x'); call jump(f,icc,cc_left,cc_right,widthcc,'x') ------------------------------------------------------------------------ r21697 | mreinhardt@nordita.org | 2014-04-24 13:38:49 +0200 (Thu, 24 Apr 2014) | 2 lines MR: bug corrected ------------------------------------------------------------------------ r21696 | mreinhardt@nordita.org | 2014-04-23 21:19:50 +0200 (Wed, 23 Apr 2014) | 2 lines MR: added spectral filtering in calculation of z dependent coefficients ------------------------------------------------------------------------ r21695 | mreinhardt@nordita.org | 2014-04-23 19:35:28 +0200 (Wed, 23 Apr 2014) | 2 lines MR: mpiallreduce_sum_arr5 added ------------------------------------------------------------------------ r21694 | pkapyla | 2014-04-23 10:45:16 +0200 (Wed, 23 Apr 2014) | 2 lines Added dummy routine to fix the auto-test. ------------------------------------------------------------------------ r21693 | pkapyla | 2014-04-22 14:31:42 +0200 (Tue, 22 Apr 2014) | 4 lines - Added boundary condition 'Fct' that sets conductive + turbulent flux equal to the input flux. Implemented only for the lower boundary in x-direction. - Allow pretend_lnTT=T in bc_ss_flux. ------------------------------------------------------------------------ r21692 | pkapyla | 2014-04-22 10:34:04 +0200 (Tue, 22 Apr 2014) | 2 lines Minor addition for work laptop setup ------------------------------------------------------------------------ r21689 | ccyang@astro.lu.se | 2014-04-18 14:36:02 +0200 (Fri, 18 Apr 2014) | 3 lines Scale the mesh Reynolds number with dimensionality for dynamical diffusion. ------------------------------------------------------------------------ r21685 | fred.gent.ncl | 2014-04-16 20:34:06 +0200 (Wed, 16 Apr 2014) | 2 lines Revised cdz boundary condition to match Ferriere 01 Eq.5 density gradient ------------------------------------------------------------------------ r21683 | AxelBrandenburg | 2014-04-14 22:02:10 +0200 (Mon, 14 Apr 2014) | 3 lines added possibility of rescaling density by a factor rescale_rho. Corrected comment in hydro.f90. ------------------------------------------------------------------------ r21680 | fred.gent.ncl | 2014-04-14 09:10:56 +0200 (Mon, 14 Apr 2014) | 2 lines Relabelled SS-Slyz cooling to WSW consistent with publications ------------------------------------------------------------------------ r21678 | fred.gent.ncl | 2014-04-12 14:20:35 +0200 (Sat, 12 Apr 2014) | 2 lines Added icooling/2 to cdata for consistency ------------------------------------------------------------------------ r21677 | fred.gent.ncl | 2014-04-12 13:08:48 +0200 (Sat, 12 Apr 2014) | 2 lines Recovered the steady disk element of SN distribution from Grand Challenge 2012 ------------------------------------------------------------------------ r21675 | wladimir.lyra | 2014-04-11 18:32:52 +0200 (Fri, 11 Apr 2014) | 2 lines Implememted border profile for temperature. ------------------------------------------------------------------------ r21673 | wladimir.lyra | 2014-04-11 00:11:03 +0200 (Fri, 11 Apr 2014) | 2 lines Initial condition: made compatible with nolog temperature ------------------------------------------------------------------------ r21672 | pkapyla | 2014-04-10 11:40:30 +0200 (Thu, 10 Apr 2014) | 2 lines Added diagnostics for dcoolx ------------------------------------------------------------------------ r21670 | AxelBrandenburg | 2014-04-09 16:56:25 +0200 (Wed, 09 Apr 2014) | 10 lines added this to continuous forcing ! +! f=(0,sinx,0) +! + case ('(0,sinx,0)') + force(:,1)=0. + force(:,2)=ampl_ff*sinx(l1:l2) + force(:,3)=0. ------------------------------------------------------------------------ r21666 | wladimir.lyra | 2014-04-08 01:50:59 +0200 (Tue, 08 Apr 2014) | 2 lines Add diagnostic uxrms ------------------------------------------------------------------------ r21665 | boris.dintrans | 2014-04-07 22:03:19 +0200 (Mon, 07 Apr 2014) | 5 lines - corrected a missing pencil dependency for fradtop diagnostic - MLT stratification improved in the single-layer case - take into account the alpha_MLT parameter ------------------------------------------------------------------------ r21662 | Bourdin.KIS | 2014-04-06 15:34:56 +0200 (Sun, 06 Apr 2014) | 2 lines Found a way to circumvent the missing F95 functionality to write one binary buffer as a block to an unformatted file. This should allow Cray compilers to use 'true_parallel_open' reliably. ------------------------------------------------------------------------ r21659 | Bourdin.KIS | 2014-04-05 22:49:52 +0200 (Sat, 05 Apr 2014) | 4 lines Added work-aound for the Cray compilers. We should really move on towards F2003, so that we can get rid of all this writing/reading temporary files and use in-memory file-buffers together with namelists. ------------------------------------------------------------------------ r21655 | Bourdin.KIS | 2014-04-05 19:34:09 +0200 (Sat, 05 Apr 2014) | 2 lines Commented all 'Conductivity' module references. This module seems not to be used. More importantly, it breaks compilation on Cray compilers (like on "archer"), because these compilers don't find modules in subdirectories (like "src/experimental/"). ------------------------------------------------------------------------ r21653 | joern.warnecke | 2014-04-05 01:46:06 +0200 (Sat, 05 Apr 2014) | 2 lines some cosmetics ------------------------------------------------------------------------ r21652 | joern.warnecke | 2014-04-05 01:19:43 +0200 (Sat, 05 Apr 2014) | 3 lines add adaptation for computing the total using a corona. add small correction to the corona related part ------------------------------------------------------------------------ r21651 | wladimir.lyra | 2014-04-04 18:10:05 +0200 (Fri, 04 Apr 2014) | 2 lines Initial condition: should use irho as log even in ldensity_nolog ------------------------------------------------------------------------ r21650 | wladimir.lyra | 2014-04-04 18:08:42 +0200 (Fri, 04 Apr 2014) | 2 lines Break if the dynamical diffusion is used without mesh hyperdiffusion ------------------------------------------------------------------------ r21649 | wladimir.lyra | 2014-04-04 18:07:55 +0200 (Fri, 04 Apr 2014) | 3 lines Implemented dynamical hyperdiffusion. ------------------------------------------------------------------------ r21648 | wladimir.lyra | 2014-04-04 18:06:57 +0200 (Fri, 04 Apr 2014) | 3 lines Break if dynamical diffusion is used without mesh hyperviscosity. ------------------------------------------------------------------------ r21646 | pkapyla | 2014-04-03 22:05:19 +0200 (Thu, 03 Apr 2014) | 3 lines Compute and print out total mass. Jörn, please adapt for the case including a corona. ------------------------------------------------------------------------ r21642 | pkapyla | 2014-04-02 10:16:08 +0200 (Wed, 02 Apr 2014) | 2 lines Added diagnostics for radiative flux ------------------------------------------------------------------------ r21638 | mikhail.modestov | 2014-03-31 17:48:49 +0200 (Mon, 31 Mar 2014) | 3 lines Initial condition module for Rayleigh-Taylor instability, checked in 2D case, xy plain. ------------------------------------------------------------------------ r21635 | kdittrich85@gmail.com | 2014-03-27 11:15:37 +0100 (Thu, 27 Mar 2014) | 3 lines small changes. without them we got compiler errors on MPIA aida machines ------------------------------------------------------------------------ r21634 | pkapyla | 2014-03-27 10:46:39 +0100 (Thu, 27 Mar 2014) | 6 lines Added possibility to read the heat conduction profile from a file also for the case of z-gravity. The values of hcond at the bottom and at the top are now computed from global data when reading the file. Changed a fatal_error to a warning so that the dynamo benchmark setup should run again. ------------------------------------------------------------------------ r21632 | kdittrich85@gmail.com | 2014-03-27 10:27:48 +0100 (Thu, 27 Mar 2014) | 3 lines added missing dependency. Caused compiler errors on some machines. ------------------------------------------------------------------------ r21631 | AxelBrandenburg | 2014-03-26 16:47:34 +0100 (Wed, 26 Mar 2014) | 1 line corrected/improved 2 warnings relevant to cases with radiation. ------------------------------------------------------------------------ r21629 | dhruba.mitra | 2014-03-25 18:12:29 +0100 (Tue, 25 Mar 2014) | 6 lines Added the possibility that different dust species have different drag coefficients betad(k) which depends on the mass bins (md) in the dustvelocity module. Remember that the pencil p%md in dustdensity is not the md in dustvelocity. but related by p%md(k) = p%nd(k)*md(k) where k runs over the number of dustspecieses. ------------------------------------------------------------------------ r21628 | AxelBrandenburg | 2014-03-25 11:33:05 +0100 (Tue, 25 Mar 2014) | 1 line remove lKit_Olem pencil request from viscosity, because it breaks cases where we use temperature ------------------------------------------------------------------------ r21627 | wladimir.lyra | 2014-03-25 07:26:51 +0100 (Tue, 25 Mar 2014) | 4 lines Break if gravity integration (planet migration) is called but both lgas_gravity and ldust_gravity are switched off. ------------------------------------------------------------------------ r21626 | wladimir.lyra | 2014-03-23 17:25:33 +0100 (Sun, 23 Mar 2014) | 4 lines Corrected comments in an initial condition (fixed-cm), and corrected a typo in reset center of mass subroutine (typo was for cyindrical coordinates). ------------------------------------------------------------------------ r21625 | wladimir.lyra | 2014-03-22 05:14:30 +0100 (Sat, 22 Mar 2014) | 4 lines Initial condition: if entropy is used, disable a subroutine that was called by default but is only for locally isothermal. ------------------------------------------------------------------------ r21624 | wladimir.lyra | 2014-03-22 04:53:28 +0100 (Sat, 22 Mar 2014) | 4 lines Initial condition: add different widths of the magnetic field smoothing. ------------------------------------------------------------------------ r21622 | Iomsn1@googlemail.com | 2014-03-21 19:57:20 +0100 (Fri, 21 Mar 2014) | 4 lines Major changes. Imrpoved performance. ------------------------------------------------------------------------ r21621 | Iomsn1@googlemail.com | 2014-03-21 19:57:00 +0100 (Fri, 21 Mar 2014) | 4 lines Major changes. Improved performance. ------------------------------------------------------------------------ r21620 | joern.warnecke | 2014-03-19 14:48:20 +0100 (Wed, 19 Mar 2014) | 2 lines fixed some errors in the coronal temperature profile ------------------------------------------------------------------------ r21619 | wladimir.lyra | 2014-03-19 11:07:05 +0100 (Wed, 19 Mar 2014) | 3 lines Corrected typo in outflow boundary condition for y (spherical coordinates). ------------------------------------------------------------------------ r21618 | pkapyla | 2014-03-18 21:54:13 +0100 (Tue, 18 Mar 2014) | 3 lines Avoid stopping the code in spherical coordinates with lhcond_global=T, added diagnostics. ------------------------------------------------------------------------ r21617 | joern.warnecke | 2014-03-18 14:12:31 +0100 (Tue, 18 Mar 2014) | 2 lines inserted error message, when using lupw_rho for lnrho ------------------------------------------------------------------------ r21614 | dhruba.mitra | 2014-03-17 15:55:05 +0100 (Mon, 17 Mar 2014) | 2 lines Helicity of force is cutoff above z = z_0 ------------------------------------------------------------------------ r21612 | AxelBrandenburg | 2014-03-15 18:06:33 +0100 (Sat, 15 Mar 2014) | 3 lines Can this dsdr not be using gss instead? Alternatively, all other energy modules need to adapted to avoid the 31 auto-test failures. ------------------------------------------------------------------------ r21611 | AxelBrandenburg | 2014-03-15 15:09:48 +0100 (Sat, 15 Mar 2014) | 2 lines idiag_TTmz implemented ------------------------------------------------------------------------ r21610 | mreinhardt@nordita.org | 2014-03-15 00:49:35 +0100 (Sat, 15 Mar 2014) | 2 lines MR: fixed a bug ------------------------------------------------------------------------ r21609 | pkapyla | 2014-03-14 23:39:08 +0100 (Fri, 14 Mar 2014) | 2 lines Corrected comments for the Fgs (black body) boundary condition. ------------------------------------------------------------------------ r21608 | pkapyla | 2014-03-14 23:26:23 +0100 (Fri, 14 Mar 2014) | 5 lines Compute also hcondxtop for the Fgs-boundary condition when having x-gravity and spherical coordinates or lconvection_gravx (and not lhcond_global). Currently implemented only for constant heat conductivity. ------------------------------------------------------------------------ r21607 | mreinhardt@nordita.org | 2014-03-14 13:02:36 +0100 (Fri, 14 Mar 2014) | 2 lines MR: changed merge_ranges into function ------------------------------------------------------------------------ r21605 | pkapyla | 2014-03-14 09:11:12 +0100 (Fri, 14 Mar 2014) | 6 lines - entropy.f90: added diagnostics, corrected diagnostic pencil dependency, added c_p for convective fluxes in the manual - gravity_simple.f90: added diagnostics, fail if sharing a variable fails - hydro.f90: added diagnostics - density.f90: removed a debugging output ------------------------------------------------------------------------ r21603 | mreinhardt@nordita.org | 2014-03-13 16:19:49 +0100 (Thu, 13 Mar 2014) | 2 lines MR: changes in handling of ranges; function indgen added ------------------------------------------------------------------------ r21602 | dhruba.mitra | 2014-03-13 16:16:38 +0100 (Thu, 13 Mar 2014) | 3 lines A framework to use the Kitchanov-Olemski Lambda effect where the lambda coefficients depends on radial gradient of entropy ------------------------------------------------------------------------ r21601 | nils.e.haugen@gmail.com | 2014-03-13 15:01:52 +0100 (Thu, 13 Mar 2014) | 2 lines added new forcing profile. ------------------------------------------------------------------------ r21599 | mreinhardt@nordita.org | 2014-03-13 00:50:03 +0100 (Thu, 13 Mar 2014) | 5 lines MR: another bug fixed : This line, and those below, will be ignored-- M nompicomm.f90 ------------------------------------------------------------------------ r21598 | mreinhardt@nordita.org | 2014-03-13 00:46:23 +0100 (Thu, 13 Mar 2014) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21597 | mreinhardt@nordita.org | 2014-03-13 00:44:17 +0100 (Thu, 13 Mar 2014) | 2 lines MR: mpiallreduce_min added; a correction in mpigather_and_out ------------------------------------------------------------------------ r21596 | mreinhardt@nordita.org | 2014-03-13 00:34:47 +0100 (Thu, 13 Mar 2014) | 3 lines MR: mpiallreduce_min added; a correction in mpigather_and_out ------------------------------------------------------------------------ r21593 | AxelBrandenburg | 2014-03-10 19:07:30 +0100 (Mon, 10 Mar 2014) | 2 lines added location_fixed for blob-like continuous forcing ------------------------------------------------------------------------ r21592 | ccyang@astro.lu.se | 2014-03-10 16:23:17 +0100 (Mon, 10 Mar 2014) | 3 lines Prevent the user from using non-zero B_ext(1) with shear, which should constantly increase B_ext(2), yet to be implemented. ------------------------------------------------------------------------ r21590 | wladimir.lyra | 2014-03-10 04:55:09 +0100 (Mon, 10 Mar 2014) | 2 lines Initial condition change: allow noise to be proportional to the (radially varying) sound speed. ------------------------------------------------------------------------ r21589 | wladimir.lyra | 2014-03-10 04:54:14 +0100 (Mon, 10 Mar 2014) | 2 lines Allow the two-sided resistivity jump to have different widths in each jump. ------------------------------------------------------------------------ r21588 | AxelBrandenburg | 2014-03-10 00:09:46 +0100 (Mon, 10 Mar 2014) | 2 lines added possibility of lmomentum_ff=T now also for lforcing_cont=T ------------------------------------------------------------------------ r21586 | mreinhardt@nordita.org | 2014-03-07 17:22:21 +0100 (Fri, 07 Mar 2014) | 2 lines MR: changed box_vol into subroutine setting global box_volume; added subroutine save_grid ------------------------------------------------------------------------ r21585 | AxelBrandenburg | 2014-03-07 15:17:36 +0100 (Fri, 07 Mar 2014) | 2 lines added blob-like forcing ------------------------------------------------------------------------ r21581 | ccyang@astro.lu.se | 2014-03-06 11:53:39 +0100 (Thu, 06 Mar 2014) | 2 lines Do not detonate when checking pencils. ------------------------------------------------------------------------ r21580 | pkapyla | 2014-03-06 10:17:06 +0100 (Thu, 06 Mar 2014) | 4 lines Added missing pencil dependences for diagnostics, added cp-factor for the convective flux, allow x-dependent chit-profiles to be computed with lconvection_gravx ------------------------------------------------------------------------ r21577 | joern.warnecke | 2014-03-04 18:30:41 +0100 (Tue, 04 Mar 2014) | 2 lines add additional gwdg cluster configurations ------------------------------------------------------------------------ r21576 | mreinhardt@nordita.org | 2014-03-04 15:44:25 +0100 (Tue, 04 Mar 2014) | 2 lines MR: corrected box volume calculation in run.f90, for that introduced function box_vol in grid. ------------------------------------------------------------------------ r21574 | pkapyla | 2014-03-03 18:16:48 +0100 (Mon, 03 Mar 2014) | 2 lines PJK & MR: print out a warning regarding box volume ------------------------------------------------------------------------ r21573 | AxelBrandenburg | 2014-03-03 15:15:28 +0100 (Mon, 03 Mar 2014) | 2 lines added time step constraint from reaction rates in equ.f90 dustdensity.f90 cdata.f90 ------------------------------------------------------------------------ r21571 | mreinhardt@nordita.org | 2014-03-03 02:27:19 +0100 (Mon, 03 Mar 2014) | 2 lines MR: added mass conservation. @Petri: we should write also removal of mean angular momentum etc. with the volume elements. ------------------------------------------------------------------------ r21566 | pkapyla | 2014-02-28 18:21:36 +0100 (Fri, 28 Feb 2014) | 2 lines Fixed bugs for 2D averages ------------------------------------------------------------------------ r21564 | pkapyla | 2014-02-28 10:07:21 +0100 (Fri, 28 Feb 2014) | 2 lines Added diagnostics of potential energy and its flux for z-averages. ------------------------------------------------------------------------ r21563 | joern.warnecke | 2014-02-28 00:49:00 +0100 (Fri, 28 Feb 2014) | 2 lines small minor ------------------------------------------------------------------------ r21562 | joern.warnecke | 2014-02-28 00:38:03 +0100 (Fri, 28 Feb 2014) | 2 lines minor correction ------------------------------------------------------------------------ r21557 | pkapyla | 2014-02-26 18:16:13 +0100 (Wed, 26 Feb 2014) | 2 lines PJK & MR: added factor cp/gamma for mean entropy when rescaling the temperature. ------------------------------------------------------------------------ r21556 | ccyang@astro.lu.se | 2014-02-26 12:36:23 +0100 (Wed, 26 Feb 2014) | 2 lines Accumulate diagnostics detn and dettot between adjacent outputs. ------------------------------------------------------------------------ r21555 | Nbabkovskaia | 2014-02-26 12:00:05 +0100 (Wed, 26 Feb 2014) | 2 lines int -> anint ------------------------------------------------------------------------ r21554 | Nbabkovskaia | 2014-02-26 11:15:55 +0100 (Wed, 26 Feb 2014) | 3 lines now initial particle distribution for ACTOS is determined here ------------------------------------------------------------------------ r21553 | Nbabkovskaia | 2014-02-26 11:14:51 +0100 (Wed, 26 Feb 2014) | 3 lines removed lACTOS_part ------------------------------------------------------------------------ r21552 | Nbabkovskaia | 2014-02-26 09:59:54 +0100 (Wed, 26 Feb 2014) | 3 lines modifyed init_distr(i,k) ------------------------------------------------------------------------ r21551 | Nbabkovskaia | 2014-02-26 09:58:45 +0100 (Wed, 26 Feb 2014) | 3 lines added synchronized data ------------------------------------------------------------------------ r21550 | Nbabkovskaia | 2014-02-26 09:57:13 +0100 (Wed, 26 Feb 2014) | 3 lines added CPC data into initial distribution ------------------------------------------------------------------------ r21549 | mreinhardt@nordita.org | 2014-02-26 02:11:38 +0100 (Wed, 26 Feb 2014) | 3 lines MR: added temperature rescaling; activate by reinitialize_ss=T, initss='TTrescl', rescale_TTmeanxy /= 1 (>0) (tb simplified) ------------------------------------------------------------------------ r21546 | wladimir.lyra | 2014-02-21 01:46:02 +0100 (Fri, 21 Feb 2014) | 4 lines Corrected error in my initial condition, related to setting an initial power-law magnetic field that falls smoothly as it reaches the radial boundary. ------------------------------------------------------------------------ r21543 | ccyang@astro.lu.se | 2014-02-20 02:25:15 +0100 (Thu, 20 Feb 2014) | 2 lines Correct the binding energy scaling. ------------------------------------------------------------------------ r21542 | ccyang@astro.lu.se | 2014-02-20 02:21:27 +0100 (Thu, 20 Feb 2014) | 3 lines Initialize the detonation energy field to zero instead of tiny positivie number. ------------------------------------------------------------------------ r21541 | ccyang@astro.lu.se | 2014-02-20 02:20:39 +0100 (Thu, 20 Feb 2014) | 3 lines Remove the equality in positive definite polynomial interpolation to allow for zero that some fields may assume. ------------------------------------------------------------------------ r21540 | ccyang@astro.lu.se | 2014-02-19 22:13:39 +0100 (Wed, 19 Feb 2014) | 2 lines The state of the detonation energy should last for the whole time step. ------------------------------------------------------------------------ r21539 | ccyang@astro.lu.se | 2014-02-19 17:57:53 +0100 (Wed, 19 Feb 2014) | 2 lines Remove conflict of a loop label. ------------------------------------------------------------------------ r21538 | ccyang@astro.lu.se | 2014-02-19 17:43:44 +0100 (Wed, 19 Feb 2014) | 2 lines Add the possibility to smooth the point detonation multiple times. ------------------------------------------------------------------------ r21537 | AxelBrandenburg | 2014-02-19 13:29:16 +0100 (Wed, 19 Feb 2014) | 2 lines 2-frequency source function implemented ------------------------------------------------------------------------ r21533 | ccyang@astro.lu.se | 2014-02-16 22:35:31 +0100 (Sun, 16 Feb 2014) | 2 lines Remove redundant boundary communications. ------------------------------------------------------------------------ r21532 | ccyang@astro.lu.se | 2014-02-16 21:49:04 +0100 (Sun, 16 Feb 2014) | 2 lines Initialize the detonation energy field with tiny positve value. ------------------------------------------------------------------------ r21531 | ccyang@astro.lu.se | 2014-02-16 21:46:54 +0100 (Sun, 16 Feb 2014) | 3 lines Fix a bug of switching on positive definiteness in ghost cell interpolation. ------------------------------------------------------------------------ r21529 | ccyang@astro.lu.se | 2014-02-16 14:39:24 +0100 (Sun, 16 Feb 2014) | 3 lines Make positive definiteness for polynomial interpolation manually switchable for each field. ------------------------------------------------------------------------ r21528 | ccyang@astro.lu.se | 2014-02-16 14:35:42 +0100 (Sun, 16 Feb 2014) | 2 lines Make the index of the detonation energy public. ------------------------------------------------------------------------ r21527 | ccyang@astro.lu.se | 2014-02-16 14:34:57 +0100 (Sun, 16 Feb 2014) | 2 lines Add yz-average rho2mx. ------------------------------------------------------------------------ r21523 | ccyang@astro.lu.se | 2014-02-15 17:40:08 +0100 (Sat, 15 Feb 2014) | 3 lines Extract the detonation facility in thermal_energy into a stand-alone module. ------------------------------------------------------------------------ r21522 | ccyang@astro.lu.se | 2014-02-15 17:36:42 +0100 (Sat, 15 Feb 2014) | 2 lines Make smooth kernel construction a stand-alone, public subroutine. ------------------------------------------------------------------------ r21521 | wladimir.lyra | 2014-02-14 21:41:39 +0100 (Fri, 14 Feb 2014) | 4 lines particles_dust with the changes for n-body in cartesian ------------------------------------------------------------------------ r21518 | wladimir.lyra | 2014-02-14 21:14:58 +0100 (Fri, 14 Feb 2014) | 8 lines Rewrite some of the particle N-body code, to add particle gravity and do the position and velocity updating always in Cartesian coordinates, even if the grid is polar. The conservation of the Jacobi constant is much better, allowing us to reproduce the Tisserand tails. ------------------------------------------------------------------------ r21516 | ccyang@astro.lu.se | 2014-02-14 15:06:35 +0100 (Fri, 14 Feb 2014) | 2 lines Add mpiallreduce_or. ------------------------------------------------------------------------ r21515 | mreinhardt@nordita.org | 2014-02-14 13:10:32 +0100 (Fri, 14 Feb 2014) | 2 lines MR: input check for downsampling added ------------------------------------------------------------------------ r21514 | mreinhardt@nordita.org | 2014-02-14 13:09:35 +0100 (Fri, 14 Feb 2014) | 2 lines MR: added a parameter ------------------------------------------------------------------------ r21513 | ccyang@astro.lu.se | 2014-02-14 12:22:41 +0100 (Fri, 14 Feb 2014) | 2 lines Zero ghost cells before boundary communications. ------------------------------------------------------------------------ r21512 | ccyang@astro.lu.se | 2014-02-14 12:20:32 +0100 (Fri, 14 Feb 2014) | 2 lines Only zero ghosts cells where necessary. ------------------------------------------------------------------------ r21511 | mreinhardt@nordita.org | 2014-02-14 02:07:35 +0100 (Fri, 14 Feb 2014) | 2 lines MR: (almost) reverted earlier edit because some serious (until now hidden) problems ------------------------------------------------------------------------ r21510 | mreinhardt@nordita.org | 2014-02-13 21:33:44 +0100 (Thu, 13 Feb 2014) | 2 lines MR: changes for writing downsampled snapshots indepedently ------------------------------------------------------------------------ r21509 | mreinhardt@nordita.org | 2014-02-13 21:14:57 +0100 (Thu, 13 Feb 2014) | 3 lines MR: changed declaration of f array globally to assumed-shape (necessary for downsampling) ------------------------------------------------------------------------ r21508 | mreinhardt@nordita.org | 2014-02-13 21:12:51 +0100 (Thu, 13 Feb 2014) | 2 lines MR: index calculation for downsampling corrected ------------------------------------------------------------------------ r21507 | mreinhardt@nordita.org | 2014-02-13 18:22:16 +0100 (Thu, 13 Feb 2014) | 2 lines MR: dsnap_down in runpars; further preparations for downsampled output ------------------------------------------------------------------------ r21506 | mreinhardt@nordita.org | 2014-02-13 18:03:57 +0100 (Thu, 13 Feb 2014) | 2 lines MR: new parameter dsnap_down for downsampled output, some more slight changes for downsampling ------------------------------------------------------------------------ r21505 | wladimir.lyra | 2014-02-13 15:11:13 +0100 (Thu, 13 Feb 2014) | 2 lines add implicit diffusion to technical_nompi, to compile pc_collect. Thanks Chao-Chin for the fix. ------------------------------------------------------------------------ r21502 | wladimir.lyra | 2014-02-12 22:37:47 +0100 (Wed, 12 Feb 2014) | 4 lines Change rparam by read_startpars, following Mattias change in run.f90 from 31-oct-13. ------------------------------------------------------------------------ r21501 | joern.warnecke | 2014-02-12 15:40:34 +0100 (Wed, 12 Feb 2014) | 2 lines minor corrections ------------------------------------------------------------------------ r21500 | mreinhardt@nordita.org | 2014-02-11 20:57:01 +0100 (Tue, 11 Feb 2014) | 2 lines MR: calculation of first local output indices for each direction for downsampling added ------------------------------------------------------------------------ r21499 | mreinhardt@nordita.org | 2014-02-11 20:52:35 +0100 (Tue, 11 Feb 2014) | 2 lines MR: downsampled output in VARn (n>0) snapshots added ------------------------------------------------------------------------ r21498 | mreinhardt@nordita.org | 2014-02-11 20:48:29 +0100 (Tue, 11 Feb 2014) | 3 lines MR: initialize_mpicomm now called before read_runpars ------------------------------------------------------------------------ r21497 | mreinhardt@nordita.org | 2014-02-11 17:06:40 +0100 (Tue, 11 Feb 2014) | 2 lines MR: preparations for downsampled output ------------------------------------------------------------------------ r21496 | mreinhardt@nordita.org | 2014-02-11 16:40:12 +0100 (Tue, 11 Feb 2014) | 2 lines MR: mpibcast_cmplx_arr replaced by mpibcast_cmplx_arr_dbl ------------------------------------------------------------------------ r21495 | mreinhardt@nordita.org | 2014-02-11 00:26:39 +0100 (Tue, 11 Feb 2014) | 3 lines MR: changes for fix of KIND problem in mpibcast_cmplx_arr ------------------------------------------------------------------------ r21494 | mreinhardt@nordita.org | 2014-02-11 00:10:49 +0100 (Tue, 11 Feb 2014) | 2 lines MR: KIND problem in mpibcast_cmplx_arr fixed ------------------------------------------------------------------------ r21491 | joern.warnecke | 2014-02-10 14:57:06 +0100 (Mon, 10 Feb 2014) | 2 lines corrected diagnosis for abmxy ------------------------------------------------------------------------ r21490 | ccyang@astro.lu.se | 2014-02-10 13:25:15 +0100 (Mon, 10 Feb 2014) | 2 lines Make the ending index of the f-array optional for zero_ghosts. ------------------------------------------------------------------------ r21489 | pkapyla | 2014-02-10 11:38:40 +0100 (Mon, 10 Feb 2014) | 2 lines Compute and output chit in code units for a given physical value. ------------------------------------------------------------------------ r21488 | ccyang@astro.lu.se | 2014-02-08 01:07:04 +0100 (Sat, 08 Feb 2014) | 2 lines Fix the dependency of snapshot.o. ------------------------------------------------------------------------ r21487 | joern.warnecke | 2014-02-07 12:13:10 +0100 (Fri, 07 Feb 2014) | 2 lines corrected Rayleigh number calculation ------------------------------------------------------------------------ r21485 | mreinhardt@nordita.org | 2014-02-06 01:03:30 +0100 (Thu, 06 Feb 2014) | 2 lines MR: mpigather_and_out rewritten ------------------------------------------------------------------------ r21484 | mreinhardt@nordita.org | 2014-02-05 23:57:11 +0100 (Wed, 05 Feb 2014) | 3 lines MR: added ordering of z ranges ------------------------------------------------------------------------ r21483 | mreinhardt@nordita.org | 2014-02-05 23:51:17 +0100 (Wed, 05 Feb 2014) | 2 lines MR: fixed a bug in write_full_columns; added quick_sort for integers ------------------------------------------------------------------------ r21482 | joern.warnecke | 2014-02-04 14:56:50 +0100 (Tue, 04 Feb 2014) | 2 lines changed the initial magnetic field ------------------------------------------------------------------------ r21481 | AxelBrandenburg | 2014-02-02 21:15:05 +0100 (Sun, 02 Feb 2014) | 2 lines fixed syntax error or r21477 ------------------------------------------------------------------------ r21480 | Nbabkovskaia | 2014-01-31 13:15:09 +0100 (Fri, 31 Jan 2014) | 4 lines added initial small distribution of particles ------------------------------------------------------------------------ r21479 | joern.warnecke | 2014-01-30 20:48:54 +0100 (Thu, 30 Jan 2014) | 2 lines correction in defining modified Ra ------------------------------------------------------------------------ r21478 | mreinhardt@nordita.org | 2014-01-30 18:11:01 +0100 (Thu, 30 Jan 2014) | 2 lines MR: changes due to move of *optest to General ------------------------------------------------------------------------ r21477 | mreinhardt@nordita.org | 2014-01-30 18:05:12 +0100 (Thu, 30 Jan 2014) | 2 lines MR: some simplifications; removed MVAR, MAUX specifications (should be given in cparam.local) ------------------------------------------------------------------------ r21476 | mreinhardt@nordita.org | 2014-01-30 17:49:28 +0100 (Thu, 30 Jan 2014) | 3 lines MR: changed declarations of uxbtestm, jxbtestm; allowed for x parallelization; removed njtest, MVAR, MAUX specifications (should be given in cparam.local) ------------------------------------------------------------------------ r21475 | joern.warnecke | 2014-01-30 17:23:33 +0100 (Thu, 30 Jan 2014) | 2 lines correction for the magnetic field ------------------------------------------------------------------------ r21474 | joern.warnecke | 2014-01-30 15:54:52 +0100 (Thu, 30 Jan 2014) | 2 lines some correction in cig benchmark ------------------------------------------------------------------------ r21473 | mikhail.modestov | 2014-01-30 14:15:25 +0100 (Thu, 30 Jan 2014) | 1 line corrected battery term and inserted new initial condition under hydro ------------------------------------------------------------------------ r21472 | AxelBrandenburg | 2014-01-30 14:01:12 +0100 (Thu, 30 Jan 2014) | 1 line improved a comment ------------------------------------------------------------------------ r21471 | NBabkovskaia | 2014-01-30 13:42:19 +0100 (Thu, 30 Jan 2014) | 3 lines minor changes in reading ACTOS data ------------------------------------------------------------------------ r21470 | mreinhardt@nordita.org | 2014-01-30 05:17:55 +0100 (Thu, 30 Jan 2014) | 2 lines MR: adapted use of *optest ------------------------------------------------------------------------ r21469 | mreinhardt@nordita.org | 2014-01-29 22:42:42 +0100 (Wed, 29 Jan 2014) | 2 lines MR: fix for the moment ------------------------------------------------------------------------ r21468 | mreinhardt@nordita.org | 2014-01-29 20:01:50 +0100 (Wed, 29 Jan 2014) | 2 lines MR: fix to calm a compiler ------------------------------------------------------------------------ r21467 | mreinhardt@nordita.org | 2014-01-29 19:39:47 +0100 (Wed, 29 Jan 2014) | 2 lines MR: changed calls to write_by_ranges_2d_* ------------------------------------------------------------------------ r21466 | mreinhardt@nordita.org | 2014-01-29 19:38:17 +0100 (Wed, 29 Jan 2014) | 2 lines MR: moved *optest routines from sub to general, some edits in write_by_ranges*, write_full_columns* ------------------------------------------------------------------------ r21465 | Nbabkovskaia | 2014-01-29 17:05:26 +0100 (Wed, 29 Jan 2014) | 4 lines changed velocity init conditions (using ACTOS data) ------------------------------------------------------------------------ r21463 | mreinhardt@nordita.org | 2014-01-27 20:09:36 +0100 (Mon, 27 Jan 2014) | 2 lines MR: debugging of mpigather_and_out_* continued ------------------------------------------------------------------------ r21462 | mreinhardt@nordita.org | 2014-01-27 19:57:08 +0100 (Mon, 27 Jan 2014) | 2 lines MR: added a trim ------------------------------------------------------------------------ r21461 | mreinhardt@nordita.org | 2014-01-27 16:46:53 +0100 (Mon, 27 Jan 2014) | 2 lines MR: some optimizations in write_by_ranges_2d, write_by_ranges_1d ------------------------------------------------------------------------ r21460 | ccyang@astro.lu.se | 2014-01-27 01:05:10 +0100 (Mon, 27 Jan 2014) | 2 lines Add the xz2 slices. ------------------------------------------------------------------------ r21459 | ccyang@astro.lu.se | 2014-01-27 01:04:35 +0100 (Mon, 27 Jan 2014) | 3 lines Fix the missing initialization of ipy2 and initialize all the ip[xyz][1-4] at declaration. ------------------------------------------------------------------------ r21454 | AxelBrandenburg | 2014-01-24 18:51:01 +0100 (Fri, 24 Jan 2014) | 2 lines introduced 2 line breaks, must be shorter than 132. ------------------------------------------------------------------------ r21453 | mreinhardt@nordita.org | 2014-01-24 18:45:36 +0100 (Fri, 24 Jan 2014) | 2 lines MR: use nk_max from cdata ------------------------------------------------------------------------ r21452 | mreinhardt@nordita.org | 2014-01-24 18:44:38 +0100 (Fri, 24 Jan 2014) | 3 lines MR: debugging mpigather_and_out_real ------------------------------------------------------------------------ r21451 | mreinhardt@nordita.org | 2014-01-23 16:36:38 +0100 (Thu, 23 Jan 2014) | 2 lines MR: fixed bug ------------------------------------------------------------------------ r21450 | mreinhardt@nordita.org | 2014-01-23 16:33:19 +0100 (Thu, 23 Jan 2014) | 2 lines MR: used nk_max, nz_max in mpigather_and_out_real, added comments ------------------------------------------------------------------------ r21449 | mreinhardt@nordita.org | 2014-01-23 16:25:12 +0100 (Thu, 23 Jan 2014) | 2 lines MR: moved nk_max, nz_max to cdata ------------------------------------------------------------------------ r21448 | mreinhardt@nordita.org | 2014-01-23 16:23:40 +0100 (Thu, 23 Jan 2014) | 2 lines MR: moved nk_max, nz_max from power_spectrum to cdata ------------------------------------------------------------------------ r21447 | ccyang@astro.lu.se | 2014-01-23 15:07:00 +0100 (Thu, 23 Jan 2014) | 2 lines Add subroutine smooth. ------------------------------------------------------------------------ r21446 | AxelBrandenburg | 2014-01-22 21:04:48 +0100 (Wed, 22 Jan 2014) | 2 lines removed debugging output ------------------------------------------------------------------------ r21443 | joern.warnecke | 2014-01-21 12:45:55 +0100 (Tue, 21 Jan 2014) | 2 lines correction ------------------------------------------------------------------------ r21442 | kdittrich85@gmail.com | 2014-01-21 12:12:34 +0100 (Tue, 21 Jan 2014) | 4 lines [Particles_dust] Added ellipsoides as an initial condition for particle positions. Also, added spheres and ellipsoides in particles_dust_blocks.f90. ------------------------------------------------------------------------ r21441 | joern.warnecke | 2014-01-21 10:38:08 +0100 (Tue, 21 Jan 2014) | 3 lines small reorganisation ------------------------------------------------------------------------ r21439 | ccyang@astro.lu.se | 2014-01-20 22:53:28 +0100 (Mon, 20 Jan 2014) | 2 lines Ohmic heating requires all resistivies present. ------------------------------------------------------------------------ r21438 | pkapyla | 2014-01-20 13:31:44 +0100 (Mon, 20 Jan 2014) | 2 lines More accurate value for the solar rotation rate ------------------------------------------------------------------------ r21436 | joern.warnecke | 2014-01-19 22:22:07 +0100 (Sun, 19 Jan 2014) | 2 lines minor ------------------------------------------------------------------------ r21435 | joern.warnecke | 2014-01-17 13:59:05 +0100 (Fri, 17 Jan 2014) | 2 lines modification for the cig_dynamo_benchmark initial conditions ------------------------------------------------------------------------ r21431 | mreinhardt@nordita.org | 2014-01-13 02:58:15 +0100 (Mon, 13 Jan 2014) | 2 lines MR: simplified Wolfgang's last fix: lvideo and lwrite_slices can only be true if cnamev is allocated ------------------------------------------------------------------------ r21430 | mreinhardt@nordita.org | 2014-01-13 02:46:32 +0100 (Mon, 13 Jan 2014) | 2 lines MR: removed lwrite_slices from run_pars as it is anyway overwritten later according to the contents of video.in ------------------------------------------------------------------------ r21429 | wdobler | 2014-01-12 20:59:39 +0100 (Sun, 12 Jan 2014) | 1 line Sanity check to catch the current problem with the testfield_z sample. ------------------------------------------------------------------------ r21428 | wdobler | 2014-01-12 20:59:29 +0100 (Sun, 12 Jan 2014) | 1 line Make usage of non-standard operator .in. at least somewhat legible. ------------------------------------------------------------------------ r21427 | wdobler | 2014-01-12 20:59:19 +0100 (Sun, 12 Jan 2014) | 1 line Make implementation of .in. operator a bit more readable. ------------------------------------------------------------------------ r21426 | anders@astro.lu.se | 2014-01-11 10:44:45 +0100 (Sat, 11 Jan 2014) | 3 lines Stop if time read from the block file is not equal to the simulation time. ------------------------------------------------------------------------ r21425 | mreinhardt@nordita.org | 2014-01-11 04:03:39 +0100 (Sat, 11 Jan 2014) | 2 lines MR: made lcalc_aameanz and lremove_meanaz independent switches ------------------------------------------------------------------------ r21424 | mreinhardt@nordita.org | 2014-01-10 19:15:14 +0100 (Fri, 10 Jan 2014) | 3 lines MR: added possibility to remmove an evolving mean (xy-averaged) field ------------------------------------------------------------------------ r21423 | mreinhardt@nordita.org | 2014-01-09 18:06:17 +0100 (Thu, 09 Jan 2014) | 2 lines MR: enabled complex calculation also for lam_testfield/=0., om_testfield=0. ------------------------------------------------------------------------ r21414 | NBabkovskaia | 2014-01-04 13:15:35 +0100 (Sat, 04 Jan 2014) | 5 lines changed initial velocity profiles fro ACTOS checked that 1 proc and mpi give the same result ------------------------------------------------------------------------ r21413 | NBabkovskaia | 2014-01-04 13:14:15 +0100 (Sat, 04 Jan 2014) | 2 lines added new initial profile for particles ------------------------------------------------------------------------ r21410 | Nbabkovskaia | 2013-12-25 16:44:43 +0100 (Wed, 25 Dec 2013) | 3 lines minor bug ------------------------------------------------------------------------ r21409 | Nbabkovskaia | 2013-12-25 16:20:22 +0100 (Wed, 25 Dec 2013) | 3 lines added initialization of velocity using ACTOS data ------------------------------------------------------------------------ r21408 | pkapyla | 2013-12-20 14:35:45 +0100 (Fri, 20 Dec 2013) | 2 lines Profile for reduced sound speed in z-direction. ------------------------------------------------------------------------ r21407 | mreinhardt@nordita.org | 2013-12-19 22:22:08 +0100 (Thu, 19 Dec 2013) | 3 lines MR: changed again handling of ierr to avoid compiler trouble ------------------------------------------------------------------------ r21406 | AxelBrandenburg | 2013-12-19 18:24:59 +0100 (Thu, 19 Dec 2013) | 2 lines added white noise forcing ------------------------------------------------------------------------ r21404 | mreinhardt@nordita.org | 2013-12-19 16:56:46 +0100 (Thu, 19 Dec 2013) | 2 lines MR: reverted last checkin ------------------------------------------------------------------------ r21403 | mreinhardt@nordita.org | 2013-12-19 16:52:03 +0100 (Thu, 19 Dec 2013) | 2 lines MR: corrected bug in outlog ------------------------------------------------------------------------ r21401 | mreinhardt@nordita.org | 2013-12-18 19:26:28 +0100 (Wed, 18 Dec 2013) | 2 lines MR: modified to calm some compilers ------------------------------------------------------------------------ r21399 | pkapyla | 2013-12-18 09:11:10 +0100 (Wed, 18 Dec 2013) | 3 lines Added a method to damp or to enforce high latitude jets in spherical simulations. ------------------------------------------------------------------------ r21398 | mreinhardt@nordita.org | 2013-12-18 03:53:59 +0100 (Wed, 18 Dec 2013) | 3 lines MR: cosmetics ------------------------------------------------------------------------ r21397 | mreinhardt@nordita.org | 2013-12-18 03:52:32 +0100 (Wed, 18 Dec 2013) | 2 lines MR: corrected - ISTATE of DLSODE has attribute INOUT ------------------------------------------------------------------------ r21396 | mreinhardt@nordita.org | 2013-12-18 03:40:38 +0100 (Wed, 18 Dec 2013) | 2 lines MR: removed debugging output ------------------------------------------------------------------------ r21395 | mreinhardt@nordita.org | 2013-12-18 03:39:34 +0100 (Wed, 18 Dec 2013) | 2 lines MR: changed handling of parameter ierr to avoid errors from some compilers ------------------------------------------------------------------------ r21394 | tavo.buk | 2013-12-17 17:39:11 +0100 (Tue, 17 Dec 2013) | 2 lines Added alphacrucis cluster at IAG-USP (Sao Paulo) ------------------------------------------------------------------------ r21393 | mreinhardt@nordita.org | 2013-12-16 19:22:20 +0100 (Mon, 16 Dec 2013) | 3 lines MR: in read_pars: handling of optional ierr corrected ------------------------------------------------------------------------ r21392 | mreinhardt@nordita.org | 2013-12-16 18:57:41 +0100 (Mon, 16 Dec 2013) | 3 lines MR: cosmetics ------------------------------------------------------------------------ r21390 | Iomsn1@googlemail.com | 2013-12-15 18:44:19 +0100 (Sun, 15 Dec 2013) | 4 lines Fixed issue of multiple knots when ncpus > 1. Makes the use of remeshing oboslete. ------------------------------------------------------------------------ r21389 | Nbabkovskaia | 2013-12-15 18:18:13 +0100 (Sun, 15 Dec 2013) | 3 lines minor ------------------------------------------------------------------------ r21388 | Nbabkovskaia | 2013-12-15 17:48:34 +0100 (Sun, 15 Dec 2013) | 5 lines fixed buffer_zone_T now ACTOS version works also on MPI ------------------------------------------------------------------------ r21387 | NBabkovskaia | 2013-12-15 16:56:28 +0100 (Sun, 15 Dec 2013) | 1 line ------------------------------------------------------------------------ r21386 | Nbabkovskaia | 2013-12-15 15:34:00 +0100 (Sun, 15 Dec 2013) | 3 lines minor bugs ------------------------------------------------------------------------ r21385 | Nbabkovskaia | 2013-12-15 15:09:49 +0100 (Sun, 15 Dec 2013) | 3 lines fixed current bugs (mpi against one proc) ------------------------------------------------------------------------ r21384 | Nbabkovskaia | 2013-12-15 13:39:04 +0100 (Sun, 15 Dec 2013) | 3 lines fixed current bugs ------------------------------------------------------------------------ r21383 | Nbabkovskaia | 2013-12-15 12:15:47 +0100 (Sun, 15 Dec 2013) | 3 lines minor (removed p%cc, not needed) ------------------------------------------------------------------------ r21382 | Nbabkovskaia | 2013-12-15 12:14:38 +0100 (Sun, 15 Dec 2013) | 3 lines added ACTOS stuff ------------------------------------------------------------------------ r21381 | Nbabkovskaia | 2013-12-15 11:46:16 +0100 (Sun, 15 Dec 2013) | 2 lines ACTOS data input ------------------------------------------------------------------------ r21380 | AxelBrandenburg | 2013-12-14 23:09:18 +0100 (Sat, 14 Dec 2013) | 10 lines hydro_kinematic.f90: added Brandt curve for Cartesian and cylindrical coords magnetic/meanfield.f90: added spiral alpha effect density.f90: allow for lnrho_vs_ss output of EoS special/gross_pitaevskii.f90: modified vortex setup Makefile.src: outcommented some -g option to keep as a reminder forcing.f90: added Gaussian blob in the z direction eos_ionization.f90: added pressure and cp as optional auxiliary pencils nohydro.f90: added i_curlo as dummy pencil ------------------------------------------------------------------------ r21379 | joern.warnecke | 2013-12-13 12:02:34 +0100 (Fri, 13 Dec 2013) | 2 lines corrected the zrange changes from yesterday ------------------------------------------------------------------------ r21378 | joern.warnecke | 2013-12-12 14:33:00 +0100 (Thu, 12 Dec 2013) | 2 lines add zrange average for density ------------------------------------------------------------------------ r21377 | joern.warnecke | 2013-12-12 14:32:23 +0100 (Thu, 12 Dec 2013) | 2 lines add zrange averages for brmsz ------------------------------------------------------------------------ r21376 | joern.warnecke | 2013-12-12 14:31:34 +0100 (Thu, 12 Dec 2013) | 2 lines add zrange average for urms ------------------------------------------------------------------------ r21375 | pkapyla | 2013-12-11 22:21:40 +0100 (Wed, 11 Dec 2013) | 2 lines Take the profile of chi_t into account when computing the time step. ------------------------------------------------------------------------ r21374 | joern.warnecke | 2013-12-11 18:40:45 +0100 (Wed, 11 Dec 2013) | 2 lines add gaussion noise profile ------------------------------------------------------------------------ r21368 | Iomsn1@googlemail.com | 2013-12-07 16:52:34 +0100 (Sat, 07 Dec 2013) | 3 lines Cosmetic improvements. ------------------------------------------------------------------------ r21367 | Iomsn1@googlemail.com | 2013-12-07 16:51:16 +0100 (Sat, 07 Dec 2013) | 3 lines Corrected the interpolation procedure. ------------------------------------------------------------------------ r21366 | Nbabkovskaia | 2013-12-06 20:51:30 +0100 (Fri, 06 Dec 2013) | 2 lines fixed autotest ------------------------------------------------------------------------ r21365 | mreinhardt@nordita.org | 2013-12-06 20:31:42 +0100 (Fri, 06 Dec 2013) | 2 lines MR: error message for eps_kinflow=0 in Roberts flow IV added ------------------------------------------------------------------------ r21363 | nishant.cosmo | 2013-12-06 18:18:43 +0100 (Fri, 06 Dec 2013) | 3 lines Modified the forcing module to allow for arbitrary number of wavevectors in k.dat file ------------------------------------------------------------------------ r21362 | AxelBrandenburg | 2013-12-05 06:21:29 +0100 (Thu, 05 Dec 2013) | 2 lines to allow source function and opacity to be frequency-dependent, I had to move the muliplication of heating rate Q and radiative flux F with opacity to an earlier point where Q and F are calculated. This means that the values of Q and F in var.dat are now also frequency-integrated and multiplied for each frequency by its frequency-dependent opacity. ------------------------------------------------------------------------ r21359 | AxelBrandenburg | 2013-12-04 09:46:13 +0100 (Wed, 04 Dec 2013) | 2 lines correction regarding double precision on gardar ------------------------------------------------------------------------ r21358 | dhruba.mitra | 2013-12-03 21:06:55 +0100 (Tue, 03 Dec 2013) | 2 lines A problem with the dimension of p%cc still exists. So I have commented this out. ------------------------------------------------------------------------ r21357 | Nbabkovskaia | 2013-12-03 17:27:05 +0100 (Tue, 03 Dec 2013) | 4 lines atmospheric aerosol: adopted model for small particles. ------------------------------------------------------------------------ r21356 | dhruba.mitra | 2013-12-03 09:57:18 +0100 (Tue, 03 Dec 2013) | 6 lines Hi Chao-Chin and Natalia, I believe Chao-Chin has introduced multiple passive scalars in the code which also makes the pencil p%cc a two dimensional object with dimensions p%cc(1:nx,1:npscalar) . As the dimension of p%cc has changed, the dustdensity module has stopped compiling because it has been assuming that p%cc is a 1D pencil. Normally a passive-scalar should not change any other module as it is be definition 'passive'. But it clearly makes some contribution in dustdensity. I have now commented this line. Natalia, I did not understand what you are trying to do with a passive scalar. Also you are multiplying it by an arbitrary number of 1e6 which is very bad practice. If you need such a number, it is better to give it a name and then have it as a defined variable. Could you two please communicate with each other to fix the problem ? ------------------------------------------------------------------------ r21355 | mreinhardt@nordita.org | 2013-12-03 03:57:38 +0100 (Tue, 03 Dec 2013) | 3 lines MR: fixed bugs in calc_coeffs ------------------------------------------------------------------------ r21353 | AxelBrandenburg | 2013-11-28 14:09:46 +0100 (Thu, 28 Nov 2013) | 1 line more alpha profiles ------------------------------------------------------------------------ r21352 | pkapyla | 2013-11-28 12:59:23 +0100 (Thu, 28 Nov 2013) | 2 lines Allow also a further uniform decrease of cs2 in case of lscale_to_cs2top ------------------------------------------------------------------------ r21351 | pkapyla | 2013-11-26 22:51:29 +0100 (Tue, 26 Nov 2013) | 4 lines Added x-profile for the reduced sound speed. Current setup works only for 1/r profiles and assumes that the rescaled cs2 is equal to cs2top in all of the domain. ------------------------------------------------------------------------ r21350 | AxelBrandenburg | 2013-11-26 08:56:36 +0100 (Tue, 26 Nov 2013) | 2 lines added power spectrum for special module variable 1. ------------------------------------------------------------------------ r21349 | AxelBrandenburg | 2013-11-26 08:53:28 +0100 (Tue, 26 Nov 2013) | 2 lines added a periodic potential, and fixed indentations ------------------------------------------------------------------------ r21348 | AxelBrandenburg | 2013-11-25 17:44:31 +0100 (Mon, 25 Nov 2013) | 2 lines use Diagnostics now needed in two places ------------------------------------------------------------------------ r21347 | nishant.cosmo | 2013-11-25 16:40:46 +0100 (Mon, 25 Nov 2013) | 2 lines slight modification in output when using power_1d ------------------------------------------------------------------------ r21345 | ccyang@astro.lu.se | 2013-11-24 23:53:56 +0100 (Sun, 24 Nov 2013) | 3 lines Remove redundant shock_init_pars related procedures, since Shock modules has nothing to do with initial conditions. ------------------------------------------------------------------------ r21336 | ccyang@astro.lu.se | 2013-11-23 15:37:36 +0100 (Sat, 23 Nov 2013) | 2 lines shock_highorder requires shared variable B_ext. ------------------------------------------------------------------------ r21335 | ccyang@astro.lu.se | 2013-11-23 15:06:31 +0100 (Sat, 23 Nov 2013) | 2 lines Further modularize the calculation of the linear term. ------------------------------------------------------------------------ r21334 | joern.warnecke | 2013-11-23 10:33:25 +0100 (Sat, 23 Nov 2013) | 3 lines changes to the initial condition for the dynamo benchmark, now it works. ------------------------------------------------------------------------ r21333 | AxelBrandenburg | 2013-11-22 20:06:56 +0100 (Fri, 22 Nov 2013) | 2 lines added also Roberts-III flow in the original definition. ------------------------------------------------------------------------ r21331 | joern.warnecke | 2013-11-21 22:17:20 +0100 (Thu, 21 Nov 2013) | 2 lines add new initial condition for a dynamo benchmark ------------------------------------------------------------------------ r21330 | joern.warnecke | 2013-11-21 22:16:31 +0100 (Thu, 21 Nov 2013) | 2 lines add new linear gravity in x direction for planetary interiors ------------------------------------------------------------------------ r21327 | mreinhardt@nordita.org | 2013-11-21 21:03:01 +0100 (Thu, 21 Nov 2013) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21326 | AxelBrandenburg | 2013-11-21 20:16:21 +0100 (Thu, 21 Nov 2013) | 3 lines corrected Omega_effect: uniform shear in radius with spherical geometry term, dAx=...-Omega_ampl*f(l1:l2,m,n,iaz)*p%x_mn ------------------------------------------------------------------------ r21325 | AxelBrandenburg | 2013-11-21 20:14:24 +0100 (Thu, 21 Nov 2013) | 3 lines added llocal_friction that does dAdt = dAdt-LLambda_aa*p%aa ------------------------------------------------------------------------ r21324 | ccyang@astro.lu.se | 2013-11-21 18:15:36 +0100 (Thu, 21 Nov 2013) | 2 lines Add initial conditions for setting up a 1D MHD shocktube. ------------------------------------------------------------------------ r21323 | AxelBrandenburg | 2013-11-21 18:08:56 +0100 (Thu, 21 Nov 2013) | 1 line added sin4y profile for meanfield_etat ------------------------------------------------------------------------ r21321 | ccyang@astro.lu.se | 2013-11-21 17:51:14 +0100 (Thu, 21 Nov 2013) | 2 lines Add support of the linear term for magnetic. ------------------------------------------------------------------------ r21320 | ccyang@astro.lu.se | 2013-11-21 15:19:17 +0100 (Thu, 21 Nov 2013) | 2 lines Add a switch for turning on a linear term in shock diffusion. ------------------------------------------------------------------------ r21319 | ccyang@astro.lu.se | 2013-11-21 15:18:23 +0100 (Thu, 21 Nov 2013) | 3 lines Add optional argument cs2 to and calculations from rho & eth in subroutine eoscalc_farray. ------------------------------------------------------------------------ r21318 | mreinhardt@nordita.org | 2013-11-21 04:09:10 +0100 (Thu, 21 Nov 2013) | 2 lines MR: fixed a bug in complex calculation for lam_testfield/=0 ------------------------------------------------------------------------ r21317 | mreinhardt@nordita.org | 2013-11-20 22:15:32 +0100 (Wed, 20 Nov 2013) | 3 lines MR: dynamical allocation for slice buffers; complex increment p=(lam_testfield,om_testfield) in complex calculation enabled ------------------------------------------------------------------------ r21316 | pkapyla | 2013-11-20 12:16:20 +0100 (Wed, 20 Nov 2013) | 2 lines Corrected comment, Dhruba please take a look. ------------------------------------------------------------------------ r21315 | AxelBrandenburg | 2013-11-20 11:24:47 +0100 (Wed, 20 Nov 2013) | 2 lines added Roberts IIIb flow ------------------------------------------------------------------------ r21314 | pkapyla | 2013-11-20 10:44:52 +0100 (Wed, 20 Nov 2013) | 2 lines Added a simple axisymmetric initial condition for Bphi. ------------------------------------------------------------------------ r21313 | mppiyali | 2013-11-19 19:15:10 +0100 (Tue, 19 Nov 2013) | 2 lines Slope limited diffusion based on Rempel (2009) coded for density for low beta plasma. Working correctly now. ------------------------------------------------------------------------ r21312 | AxelBrandenburg | 2013-11-18 22:01:07 +0100 (Mon, 18 Nov 2013) | 3 lines replaced cs0 by cs0eff in normalization of forcing amplitude, where cs0eff=cs0 when it is defined, and equal to 1 if not. ------------------------------------------------------------------------ r21311 | AxelBrandenburg | 2013-11-18 19:53:10 +0100 (Mon, 18 Nov 2013) | 1 line (i) added tensorial alpha effect and (ii) etat(y) profile proportional to sin(theta)^2, called sin2y ------------------------------------------------------------------------ r21310 | mreinhardt@nordita.org | 2013-11-18 18:49:05 +0100 (Mon, 18 Nov 2013) | 2 lines MR: fixed bug in calls to merge_ranges ------------------------------------------------------------------------ r21309 | mreinhardt@nordita.org | 2013-11-18 17:38:28 +0100 (Mon, 18 Nov 2013) | 3 lines MR: adaptations in read_power_spectrum_runpars; complex output in power_1d added ------------------------------------------------------------------------ r21308 | mreinhardt@nordita.org | 2013-11-18 17:29:22 +0100 (Mon, 18 Nov 2013) | 3 lines MR: modified parameter lists of parser and get_range ------------------------------------------------------------------------ r21307 | joern.warnecke | 2013-11-18 14:45:38 +0100 (Mon, 18 Nov 2013) | 2 lines add my new laptop ------------------------------------------------------------------------ r21306 | AxelBrandenburg | 2013-11-16 12:31:59 +0100 (Sat, 16 Nov 2013) | 2 lines added missing lpower_spectrum and corresponding declarations in Makefile.src ------------------------------------------------------------------------ r21304 | pkapyla | 2013-11-15 23:10:55 +0100 (Fri, 15 Nov 2013) | 1 line Output cs2 also at the bottom of the convection zone ------------------------------------------------------------------------ r21300 | AxelBrandenburg | 2013-11-13 12:30:01 +0100 (Wed, 13 Nov 2013) | 2 lines allowed for cooling function related to the pressure ------------------------------------------------------------------------ r21299 | ccyang@astro.lu.se | 2013-11-12 13:00:09 +0100 (Tue, 12 Nov 2013) | 2 lines Add diagnostic gshockmax. ------------------------------------------------------------------------ r21297 | sven.bingert | 2013-11-12 10:26:27 +0100 (Tue, 12 Nov 2013) | 1 line removed tab character ------------------------------------------------------------------------ r21296 | sven.bingert | 2013-11-12 10:18:21 +0100 (Tue, 12 Nov 2013) | 1 line cleanup, removed trailing whitespaces and empty lines ------------------------------------------------------------------------ r21295 | sven.bingert | 2013-11-12 10:17:18 +0100 (Tue, 12 Nov 2013) | 1 line fixed auto-test ------------------------------------------------------------------------ r21294 | Nbabkovskaia | 2013-11-11 15:49:09 +0100 (Mon, 11 Nov 2013) | 4 lines changed spot routine. Added index_N2, index_H2O to namelist ------------------------------------------------------------------------ r21291 | sven.bingert | 2013-11-11 11:30:00 +0100 (Mon, 11 Nov 2013) | 1 line minor cleanup ------------------------------------------------------------------------ r21290 | wladimir.lyra | 2013-11-10 00:47:17 +0100 (Sun, 10 Nov 2013) | 5 lines 1. Added possibility of retrograde orbiters. 2. Added lgas_gravity and ldust_gravity as switches for adding the combined gas or particle torque onto the N-bodies. ------------------------------------------------------------------------ r21288 | AxelBrandenburg | 2013-11-08 16:38:03 +0100 (Fri, 08 Nov 2013) | 2 lines changed some calls to to f95 standard ------------------------------------------------------------------------ r21287 | nils.e.haugen@gmail.com | 2013-11-08 16:13:51 +0100 (Fri, 08 Nov 2013) | 1 line Implemented boundary condition for jet inlet, which is also used by the NSCBC module. ------------------------------------------------------------------------ r21286 | mreinhardt@nordita.org | 2013-11-07 15:19:50 +0100 (Thu, 07 Nov 2013) | 2 lines MR: in calc_coefficients: nygrid -> ny (more speaking) ------------------------------------------------------------------------ r21285 | sven.bingert | 2013-11-07 15:15:21 +0100 (Thu, 07 Nov 2013) | 1 line some debugging and cleanup ------------------------------------------------------------------------ r21284 | sven.bingert | 2013-11-07 15:12:58 +0100 (Thu, 07 Nov 2013) | 1 line some debugging and cleanup ------------------------------------------------------------------------ r21283 | sven.bingert | 2013-11-07 14:09:17 +0100 (Thu, 07 Nov 2013) | 1 line added new form of the radiative loss function, some cleanup ------------------------------------------------------------------------ r21282 | sven.bingert | 2013-11-07 13:52:46 +0100 (Thu, 07 Nov 2013) | 1 line removed non-fourier heat conduction because it is now in an extra module ------------------------------------------------------------------------ r21281 | mreinhardt@nordita.org | 2013-11-06 21:05:05 +0100 (Wed, 06 Nov 2013) | 2 lines MR: fix to remove processor number dependency ------------------------------------------------------------------------ r21280 | mreinhardt@nordita.org | 2013-11-06 20:39:22 +0100 (Wed, 06 Nov 2013) | 2 lines MR: another try to fix it (see the latter ci) ------------------------------------------------------------------------ r21279 | mreinhardt@nordita.org | 2013-11-06 18:40:00 +0100 (Wed, 06 Nov 2013) | 2 lines MR: fix for the processor number dependence bug ------------------------------------------------------------------------ r21278 | ccyang@astro.lu.se | 2013-11-06 17:36:34 +0100 (Wed, 06 Nov 2013) | 2 lines Write indices for IDL. ------------------------------------------------------------------------ r21277 | sven.bingert | 2013-11-05 17:08:21 +0100 (Tue, 05 Nov 2013) | 1 line sorry was my own auto-test which I screwed up ------------------------------------------------------------------------ r21276 | sven.bingert | 2013-11-05 17:04:58 +0100 (Tue, 05 Nov 2013) | 1 line fixed auto-tests ------------------------------------------------------------------------ r21275 | sven.bingert | 2013-11-05 14:57:09 +0100 (Tue, 05 Nov 2013) | 1 line lclose was used undefined, Matthias please check ------------------------------------------------------------------------ r21274 | sven.bingert | 2013-11-05 14:52:55 +0100 (Tue, 05 Nov 2013) | 1 line added svn id to the new files ------------------------------------------------------------------------ r21273 | AxelBrandenburg | 2013-11-05 14:02:34 +0100 (Tue, 05 Nov 2013) | 1 line added alpha_tmp=cos(y(m))*sin(y(m))**2 profile ------------------------------------------------------------------------ r21272 | mreinhardt@nordita.org | 2013-11-04 21:43:03 +0100 (Mon, 04 Nov 2013) | 2 lines MR: removed unneeded dependency ------------------------------------------------------------------------ r21271 | mreinhardt@nordita.org | 2013-11-04 21:29:15 +0100 (Mon, 04 Nov 2013) | 2 lines MR: change in read_pars for backward compatibility - wrong(=outdated) data in param.nml are silently ignored ------------------------------------------------------------------------ r21269 | pkapyla | 2013-11-04 12:06:28 +0100 (Mon, 04 Nov 2013) | 4 lines Changed the prefactor of 1/840 to 1/60 for the upwinding term in the 6th order 6th derivative. Added 10th derivative for possible future upwinding purposes. The prefactor for the 10th order 10th derivative is not accurate for the time being. ------------------------------------------------------------------------ r21266 | mreinhardt@nordita.org | 2013-11-01 04:37:07 +0100 (Fri, 01 Nov 2013) | 2 lines MR: formatting of error output improved ------------------------------------------------------------------------ r21265 | mreinhardt@nordita.org | 2013-10-31 22:40:14 +0100 (Thu, 31 Oct 2013) | 3 lines MR: rparam removed ------------------------------------------------------------------------ r21264 | mreinhardt@nordita.org | 2013-10-31 22:23:25 +0100 (Thu, 31 Oct 2013) | 2 lines MR: replaced rparam by read_startpars ------------------------------------------------------------------------ r21263 | mreinhardt@nordita.org | 2013-10-31 22:04:06 +0100 (Thu, 31 Oct 2013) | 4 lines MR: read_startpars: changed for use instead of rparam; shortened by use of new subroutine read_pars; new subroutine sample_pars: standardises handling of errors in namelist, both for init and run rparam: call of read_lorenz_gauge_init_pars added ------------------------------------------------------------------------ r21262 | mreinhardt@nordita.org | 2013-10-31 21:25:23 +0100 (Thu, 31 Oct 2013) | 2 lines MR: set lenergy earlier; adapted call to read_start_pars; avoid copy of huge data massive in calls to wsnap ------------------------------------------------------------------------ r21261 | pkapyla | 2013-10-31 10:05:04 +0100 (Thu, 31 Oct 2013) | 1 line Added dependence on heatflux for slices ------------------------------------------------------------------------ r21260 | mreinhardt@nordita.org | 2013-10-31 03:41:15 +0100 (Thu, 31 Oct 2013) | 2 lines MR: updated call of calc_coefficients ------------------------------------------------------------------------ r21259 | mreinhardt@nordita.org | 2013-10-31 03:40:01 +0100 (Thu, 31 Oct 2013) | 2 lines MR: added another alternative testfield; updated call to calc_coefficients ------------------------------------------------------------------------ r21258 | mreinhardt@nordita.org | 2013-10-31 03:20:06 +0100 (Thu, 31 Oct 2013) | 3 lines MR: added Minv for another alternative testfield; fixed "factor 2 bug" by adding parameter for gridsize in averaging direction to calc_coeficients ------------------------------------------------------------------------ r21256 | sven.bingert | 2013-10-30 20:14:39 +0100 (Wed, 30 Oct 2013) | 1 line missing changes due to the new module ------------------------------------------------------------------------ r21255 | sven.bingert | 2013-10-30 20:12:04 +0100 (Wed, 30 Oct 2013) | 1 line minor cleanup ------------------------------------------------------------------------ r21254 | sven.bingert | 2013-10-30 20:10:52 +0100 (Wed, 30 Oct 2013) | 1 line new module for non-fourier (non-fickian) heatflux or optionally eighth-moment approx. ------------------------------------------------------------------------ r21253 | AxelBrandenburg | 2013-10-30 04:56:59 +0100 (Wed, 30 Oct 2013) | 1 line declare that it can calculate pencils gss and del2ss, to avoid compilation errors, but then give fatal errors if one were to compute them. ------------------------------------------------------------------------ r21252 | ccyang@astro.lu.se | 2013-10-29 12:45:52 +0100 (Tue, 29 Oct 2013) | 2 lines Add yz-average ekinmx. ------------------------------------------------------------------------ r21251 | ccyang@astro.lu.se | 2013-10-29 12:38:44 +0100 (Tue, 29 Oct 2013) | 2 lines Add xy-averages ruxuzmz and ruyuzmz. ------------------------------------------------------------------------ r21250 | ccyang@astro.lu.se | 2013-10-29 12:22:59 +0100 (Tue, 29 Oct 2013) | 2 lines Add xy-averages betamz and beta2mz. ------------------------------------------------------------------------ r21249 | ccyang@astro.lu.se | 2013-10-29 12:17:20 +0100 (Tue, 29 Oct 2013) | 3 lines Add xy-averages bxmz, bymz, bzmz, bx2mz, by2mz, bz2mz, bxbymz, bxbzmz, and bybzmz. ------------------------------------------------------------------------ r21248 | ccyang@astro.lu.se | 2013-10-29 02:34:54 +0100 (Tue, 29 Oct 2013) | 2 lines Add xy-averages bmz and b2mz. ------------------------------------------------------------------------ r21247 | mreinhardt@nordita.org | 2013-10-28 20:48:26 +0100 (Mon, 28 Oct 2013) | 2 lines MR: handling of lcont in outlog modified ------------------------------------------------------------------------ r21246 | mreinhardt@nordita.org | 2013-10-28 20:34:36 +0100 (Mon, 28 Oct 2013) | 3 lines MR: simplified code for reading from different precision by introducing generic names; relaxed consistency check for t_sp in input_snap, added overwriting of grid.dat in rgrid for restart from different precision; added lcont and location parameters to calls of outlog in input_grid where appropriate ------------------------------------------------------------------------ r21245 | ccyang@astro.lu.se | 2013-10-28 19:53:31 +0100 (Mon, 28 Oct 2013) | 2 lines Add yz-averages betamx and beta2mx. ------------------------------------------------------------------------ r21244 | ccyang@astro.lu.se | 2013-10-28 14:44:03 +0100 (Mon, 28 Oct 2013) | 3 lines Add yz-averages bxmx, bymx, bzmx, bx2mx, by2mx, bz2mx, bxbymx, bxbzmx, and bybzmx. ------------------------------------------------------------------------ r21243 | ccyang@astro.lu.se | 2013-10-28 14:19:06 +0100 (Mon, 28 Oct 2013) | 2 lines Add yz-averages bmx and b2mx. ------------------------------------------------------------------------ r21242 | ccyang@astro.lu.se | 2013-10-28 12:00:09 +0100 (Mon, 28 Oct 2013) | 2 lines Add stub subroutines for 1D averages. ------------------------------------------------------------------------ r21241 | ccyang@astro.lu.se | 2013-10-28 11:43:17 +0100 (Mon, 28 Oct 2013) | 2 lines Fix a bug with the dimension of eta_zdep and detadz. ------------------------------------------------------------------------ r21240 | wladimir.lyra | 2013-10-28 09:12:18 +0100 (Mon, 28 Oct 2013) | 4 lines Undefined quantity used in the calculation of the gravity of the gas onto the N-body particles (it was leading to NaNs in the calculation of the planet migration rate). ------------------------------------------------------------------------ r21239 | AxelBrandenburg | 2013-10-27 21:43:22 +0100 (Sun, 27 Oct 2013) | 3 lines use now angle_weight='corrected' as new default (instead of 'constant'). This only affects 1-D and 2-D runs that were not already run with angle_weight='corrected'. ------------------------------------------------------------------------ r21238 | AxelBrandenburg | 2013-10-27 21:34:40 +0100 (Sun, 27 Oct 2013) | 5 lines Fixed a wrong minus sign that I must have introduced (& checked in) during testing in: call beltrami(amplaa(j),f,iaa,KY=-ky_aa(j),phase=phasey_aa(j)) ^ ------------------------------------------------------------------------ r21237 | pkapyla | 2013-10-27 20:56:43 +0100 (Sun, 27 Oct 2013) | 4 lines Corrected computation of physical temperatures at the bottom and top of the convection zone and in the corona, assuming solar temperature at the base of the convection zone. ------------------------------------------------------------------------ r21236 | AxelBrandenburg | 2013-10-27 20:55:59 +0100 (Sun, 27 Oct 2013) | 11 lines bug fixes in initialize_forcing; thanks Chao-Chin, for noticing this! Many of us participated in this in the following revisions: 19628 dhruba.mitra profx_ampl= step(x,xminf,width_ff)-step(x,xmaxf,width_ff) 15182 joern.warnecke profx_ampl=.5*(1.-erfunc((x-r_ff)/width_ff)) 13783 dhruba.mitra profx_ampl=.5*(1.-erfunc((x-r_ff)/width_ff)) 17061 AxelBrandenburg profx_ampl=.5*(1.-erfunc((x-r_ff)/width_ff)); profx_hel=1. 15234 pkapyla profx_ampl=.5*(1.+erfunc((x-r_ff)/width_ff)) Unlike the y and z profiles, profx_ampl has only a length of nx. ------------------------------------------------------------------------ r21235 | ccyang@astro.lu.se | 2013-10-27 18:24:22 +0100 (Sun, 27 Oct 2013) | 2 lines Implement an initial facility to add z-dependent resistivity. ------------------------------------------------------------------------ r21234 | ccyang@astro.lu.se | 2013-10-27 15:20:48 +0100 (Sun, 27 Oct 2013) | 2 lines Fix a bug with using the elemental erfunc. ------------------------------------------------------------------------ r21233 | wladimir.lyra | 2013-10-27 11:06:55 +0100 (Sun, 27 Oct 2013) | 2 lines Better commented the 'd' spherical slices option. ------------------------------------------------------------------------ r21231 | wladimir.lyra | 2013-10-27 10:26:18 +0100 (Sun, 27 Oct 2013) | 2 lines spherical slices with xz2 for b2 and plasma beta ------------------------------------------------------------------------ r21230 | wladimir.lyra | 2013-10-27 10:25:46 +0100 (Sun, 27 Oct 2013) | 2 lines density slices with xz2 ------------------------------------------------------------------------ r21229 | wladimir.lyra | 2013-10-27 10:25:20 +0100 (Sun, 27 Oct 2013) | 2 lines Structure for reading the spherical slices with xz2 ------------------------------------------------------------------------ r21228 | wladimir.lyra | 2013-10-27 10:24:05 +0100 (Sun, 27 Oct 2013) | 5 lines Structure for other slices in spherical coordinates - showing yz, xz, xz2, and xy. xz2 in spherical is the equivalent to xy2 in cartesian/cylindrical ------------------------------------------------------------------------ r21227 | wladimir.lyra | 2013-10-27 04:42:37 +0100 (Sun, 27 Oct 2013) | 4 lines Added outflow boundary condition in y, and corrected a typo in outflow boundary condition in z. ------------------------------------------------------------------------ r21226 | ccyang@astro.lu.se | 2013-10-26 23:07:56 +0200 (Sat, 26 Oct 2013) | 2 lines Fix a bug with lresistivity. ------------------------------------------------------------------------ r21225 | ccyang@astro.lu.se | 2013-10-26 16:59:11 +0200 (Sat, 26 Oct 2013) | 2 lines Declare the error function erfunc as elemental. ------------------------------------------------------------------------ r21224 | ccyang@astro.lu.se | 2013-10-26 13:55:52 +0200 (Sat, 26 Oct 2013) | 2 lines Add auxiliary variable jj and restructure the calculations with it. ------------------------------------------------------------------------ r21223 | mreinhardt@nordita.org | 2013-10-26 04:10:35 +0200 (Sat, 26 Oct 2013) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21221 | wladimir.lyra | 2013-10-25 19:23:11 +0200 (Fri, 25 Oct 2013) | 4 lines Included a density boundary condition for stratified equilibrium in spherical coordinates. ------------------------------------------------------------------------ r21220 | mreinhardt@nordita.org | 2013-10-24 23:57:49 +0200 (Thu, 24 Oct 2013) | 5 lines MR: added locationi, lcont parameters to calls of outlog and removed file parameter where appropriate; introduced versions of input_snap, input_globals, rgrid, rproc_bounds with explicit data types (single or double); enabled reading from other precision (lread_from_other_prec=T) ------------------------------------------------------------------------ r21219 | mreinhardt@nordita.org | 2013-10-24 23:55:36 +0200 (Thu, 24 Oct 2013) | 3 lines MR: new options lcont,location for outlog introduced handling of EOF refined ------------------------------------------------------------------------ r21218 | mreinhardt@nordita.org | 2013-10-24 18:01:32 +0200 (Thu, 24 Oct 2013) | 2 lines MR: modified alternative testfield ------------------------------------------------------------------------ r21217 | mreinhardt@nordita.org | 2013-10-24 17:45:05 +0200 (Thu, 24 Oct 2013) | 4 lines MR: new E_ij diagnostics; added call to calc_means_hydro in initialize_testfield; corrected call of calc_coefficients; changed order of linear testfields; added set_bbtest_alt for alternative choices of harmonic testfields ------------------------------------------------------------------------ r21216 | mreinhardt@nordita.org | 2013-10-24 17:30:19 +0200 (Thu, 24 Oct 2013) | 3 lines MR: added more E_ij diagnostics ------------------------------------------------------------------------ r21215 | mreinhardt@nordita.org | 2013-10-24 15:33:33 +0200 (Thu, 24 Oct 2013) | 2 lines MR: added lread_from_other_prec to init_pars and run_pars ------------------------------------------------------------------------ r21214 | ccyang@astro.lu.se | 2013-10-24 15:20:20 +0200 (Thu, 24 Oct 2013) | 2 lines Rescale the mesh Reynolds number and its default. ------------------------------------------------------------------------ r21213 | mreinhardt@nordita.org | 2013-10-24 15:18:47 +0200 (Thu, 24 Oct 2013) | 2 lines MR: new switch lread_from_other_prec introduced to enable restarts from different precision ------------------------------------------------------------------------ r21212 | sven.bingert | 2013-10-23 15:55:44 +0200 (Wed, 23 Oct 2013) | 1 line removed trailing whitespace and empty lines ------------------------------------------------------------------------ r21211 | sven.bingert | 2013-10-23 15:54:11 +0200 (Wed, 23 Oct 2013) | 1 line added missing dependencies for diagnostic pencils ------------------------------------------------------------------------ r21210 | ccyang@astro.lu.se | 2013-10-23 12:48:21 +0200 (Wed, 23 Oct 2013) | 2 lines Move the zero_ghosts facility from bfield to boundcond. ------------------------------------------------------------------------ r21209 | ccyang@astro.lu.se | 2013-10-23 10:02:10 +0200 (Wed, 23 Oct 2013) | 3 lines Zero out ghost cells before boundary communications, as a temporary solution to a known bug when shear is present. ------------------------------------------------------------------------ r21208 | mreinhardt@nordita.org | 2013-10-22 16:27:59 +0200 (Tue, 22 Oct 2013) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21207 | ccyang@astro.lu.se | 2013-10-22 15:05:26 +0200 (Tue, 22 Oct 2013) | 2 lines Fix a bug in calculating the hyper mesh resistivity. ------------------------------------------------------------------------ r21206 | mreinhardt@nordita.org | 2013-10-22 14:48:45 +0200 (Tue, 22 Oct 2013) | 3 lines MR: m, n target attribute given ------------------------------------------------------------------------ r21205 | mreinhardt@nordita.org | 2013-10-22 14:37:00 +0200 (Tue, 22 Oct 2013) | 3 lines MR: corrected: connection between mnprof and m or n noe permanent; Minv for itestfield='1-alt' and 'linear' added; setting of lfirstpoint corrected; calculation of Eij for diagnostic output corrected; corrected: use full velocity in Uxbtest. ------------------------------------------------------------------------ r21204 | mreinhardt@nordita.org | 2013-10-22 14:12:55 +0200 (Tue, 22 Oct 2013) | 2 lines MR: Glen Roberts flow w.r.t. x and z added ------------------------------------------------------------------------ r21203 | mreinhardt@nordita.org | 2013-10-22 14:03:58 +0200 (Tue, 22 Oct 2013) | 2 lines MR: allowed for itestfield /= '1', made '4' and 'linear' synonymous; calculation of means in hydro now triggered in initialize_testfield ------------------------------------------------------------------------ r21202 | pkapyla | 2013-10-22 13:16:22 +0200 (Tue, 22 Oct 2013) | 2 lines Added ltestfield_newx and ltestfield_newy for domain sizes not equal to 2pi. ------------------------------------------------------------------------ r21201 | mreinhardt@nordita.org | 2013-10-22 10:44:48 +0200 (Tue, 22 Oct 2013) | 3 lines MR: minor changes to make the use of m,n from Cdata explicit. ------------------------------------------------------------------------ r21198 | ccyang@astro.lu.se | 2013-10-20 21:27:47 +0200 (Sun, 20 Oct 2013) | 2 lines Correct the unit for implicit resistivity. ------------------------------------------------------------------------ r21197 | ccyang@astro.lu.se | 2013-10-20 21:25:57 +0200 (Sun, 20 Oct 2013) | 2 lines Correct the unit for explicit resistivity. ------------------------------------------------------------------------ r21196 | AxelBrandenburg | 2013-10-20 01:17:41 +0200 (Sun, 20 Oct 2013) | 2 lines corrected settings for entropy in Tsallis stratification ------------------------------------------------------------------------ r21193 | AxelBrandenburg | 2013-10-19 23:46:04 +0200 (Sat, 19 Oct 2013) | 2 lines some labels corrected ------------------------------------------------------------------------ r21192 | ccyang@astro.lu.se | 2013-10-19 14:57:16 +0200 (Sat, 19 Oct 2013) | 3 lines Fix the unit of the resistivities. ------------------------------------------------------------------------ r21191 | ccyang@astro.lu.se | 2013-10-19 12:12:51 +0200 (Sat, 19 Oct 2013) | 3 lines Correct an error message. ------------------------------------------------------------------------ r21190 | ccyang@astro.lu.se | 2013-10-17 12:31:31 +0200 (Thu, 17 Oct 2013) | 2 lines Add dummy optional argument ignoredx for all Deriv modules for consistency. ------------------------------------------------------------------------ r21189 | ccyang@astro.lu.se | 2013-10-16 23:50:56 +0200 (Wed, 16 Oct 2013) | 3 lines Turn on the uy0 x B_ext term by default. ------------------------------------------------------------------------ r21187 | mreinhardt@nordita.org | 2013-10-15 23:53:39 +0200 (Tue, 15 Oct 2013) | 2 lines MR: outsourced calc_means_hydro from initialize_hydro ------------------------------------------------------------------------ r21186 | mreinhardt@nordita.org | 2013-10-15 23:48:44 +0200 (Tue, 15 Oct 2013) | 2 lines MR: outsourced calc_means_hydro from calc_lhydro_pars ------------------------------------------------------------------------ r21185 | ccyang@astro.lu.se | 2013-10-15 00:23:05 +0200 (Tue, 15 Oct 2013) | 3 lines Optimize subroutine mesh_hyper_resistivity. ------------------------------------------------------------------------ r21184 | ccyang@astro.lu.se | 2013-10-14 23:08:15 +0200 (Mon, 14 Oct 2013) | 3 lines Fix a sign error in mesh_hyper_resistivity. ------------------------------------------------------------------------ r21183 | ccyang@astro.lu.se | 2013-10-14 22:23:22 +0200 (Mon, 14 Oct 2013) | 3 lines Use del4 instead of der4 in subroutine mesh_hyper_resistivity. ------------------------------------------------------------------------ r21182 | ccyang@astro.lu.se | 2013-10-11 17:26:51 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics vAmax, vAmin, and vAm. ------------------------------------------------------------------------ r21181 | ccyang@astro.lu.se | 2013-10-11 17:19:51 +0200 (Fri, 11 Oct 2013) | 3 lines Add pencil va2. ------------------------------------------------------------------------ r21180 | joern.warnecke@gmail.com | 2013-10-11 13:45:13 +0200 (Fri, 11 Oct 2013) | 2 lines minor correction ------------------------------------------------------------------------ r21179 | ccyang@astro.lu.se | 2013-10-11 11:41:44 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics jxmax, jymax, jzmax, jxm, jym, jzm, jx2m, jy2m, and, jz2m. ------------------------------------------------------------------------ r21178 | ccyang@astro.lu.se | 2013-10-11 11:32:15 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics jmax, jmin, jrms, jm, and j2m. ------------------------------------------------------------------------ r21177 | ccyang@astro.lu.se | 2013-10-11 11:19:48 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics bxbym, bxbzm, and bybzm. ------------------------------------------------------------------------ r21176 | ccyang@astro.lu.se | 2013-10-11 11:04:31 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostic bm. ------------------------------------------------------------------------ r21175 | ccyang@astro.lu.se | 2013-10-11 10:44:19 +0200 (Fri, 11 Oct 2013) | 3 lines Handle differently the case of p%b2 = 0 when calculating p%beta. ------------------------------------------------------------------------ r21174 | ccyang@astro.lu.se | 2013-10-11 10:27:35 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics betamax, betamin, and betam. ------------------------------------------------------------------------ r21173 | ccyang@astro.lu.se | 2013-10-11 10:14:14 +0200 (Fri, 11 Oct 2013) | 3 lines Add pencil beta. ------------------------------------------------------------------------ r21172 | ccyang@astro.lu.se | 2013-10-11 09:56:58 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics b2m, bx2m, by2m, bz2m, dbx2m, dby2m, and dbz2m. ------------------------------------------------------------------------ r21171 | ccyang@astro.lu.se | 2013-10-11 09:39:51 +0200 (Fri, 11 Oct 2013) | 3 lines Add diagnostics bmin and divbrms. ------------------------------------------------------------------------ r21170 | mreinhardt@nordita.org | 2013-10-10 21:59:32 +0200 (Thu, 10 Oct 2013) | 2 lines MR: changes in communication to avoid NaNs ------------------------------------------------------------------------ r21169 | mreinhardt@nordita.org | 2013-10-10 21:58:42 +0200 (Thu, 10 Oct 2013) | 2 lines MR: changes in communication to avoid NaNs ------------------------------------------------------------------------ r21168 | ccyang@astro.lu.se | 2013-10-10 16:10:07 +0200 (Thu, 10 Oct 2013) | 3 lines Modified documentation of the diagnostics. ------------------------------------------------------------------------ r21167 | mreinhardt@nordita.org | 2013-10-09 19:37:05 +0200 (Wed, 09 Oct 2013) | 2 lines MR: change for debugging ------------------------------------------------------------------------ r21166 | mreinhardt@nordita.org | 2013-10-09 17:41:17 +0200 (Wed, 09 Oct 2013) | 2 lines MR: debugging ------------------------------------------------------------------------ r21165 | mreinhardt@nordita.org | 2013-10-09 17:27:04 +0200 (Wed, 09 Oct 2013) | 2 lines MR: more for debugging ------------------------------------------------------------------------ r21164 | mreinhardt@nordita.org | 2013-10-09 17:20:07 +0200 (Wed, 09 Oct 2013) | 2 lines MR: changes for debugging -- code not valid for ncpus>1 ------------------------------------------------------------------------ r21163 | ccyang@astro.lu.se | 2013-10-09 16:47:12 +0200 (Wed, 09 Oct 2013) | 3 lines Add diagnostics bxm, bym, bzm, dbxm, dbym, and dbzm. ------------------------------------------------------------------------ r21162 | ccyang@astro.lu.se | 2013-10-09 16:27:25 +0200 (Wed, 09 Oct 2013) | 3 lines Add Ohmic heating. ------------------------------------------------------------------------ r21161 | ccyang@astro.lu.se | 2013-10-09 15:01:54 +0200 (Wed, 09 Oct 2013) | 3 lines Add pencil j2. ------------------------------------------------------------------------ r21158 | ccyang@astro.lu.se | 2013-10-09 02:16:22 +0200 (Wed, 09 Oct 2013) | 4 lines Restructure the calculation of the term u x B to more correctly account for sheared boundary conditions. ------------------------------------------------------------------------ r21157 | ccyang@astro.lu.se | 2013-10-09 02:14:44 +0200 (Wed, 09 Oct 2013) | 3 lines Early finalize boundary conditions for bfield module. ------------------------------------------------------------------------ r21156 | ccyang@astro.lu.se | 2013-10-09 02:13:13 +0200 (Wed, 09 Oct 2013) | 3 lines Add optional argument x to routine get_uy0_shear. ------------------------------------------------------------------------ r21155 | joern.warnecke@gmail.com | 2013-10-08 23:45:54 +0200 (Tue, 08 Oct 2013) | 2 lines use a different profile for the hcond in the coronal layer ------------------------------------------------------------------------ r21151 | pkapyla | 2013-10-07 22:42:14 +0200 (Mon, 07 Oct 2013) | 2 lines Should now work with arbitrary rho0 and cs0 and not just rho0 = cs0 = 1. ------------------------------------------------------------------------ r21150 | joern.warnecke | 2013-10-07 22:08:24 +0200 (Mon, 07 Oct 2013) | 3 lines change in the spherical_convection initial condition, otherwise the hydrostatic equilibrium is not in place ------------------------------------------------------------------------ r21149 | joern.warnecke | 2013-10-07 11:54:57 +0200 (Mon, 07 Oct 2013) | 2 lines minor ------------------------------------------------------------------------ r21148 | wladimir.lyra | 2013-10-07 04:08:05 +0200 (Mon, 07 Oct 2013) | 2 lines typo in comment ------------------------------------------------------------------------ r21147 | joern.warnecke | 2013-10-06 20:21:09 +0200 (Sun, 06 Oct 2013) | 2 lines added option for coronal layer ------------------------------------------------------------------------ r21146 | pkapyla | 2013-10-06 09:06:41 +0200 (Sun, 06 Oct 2013) | 2 lines Corrected bcz='Fgs' boundary condition in the case that chit has a profile. ------------------------------------------------------------------------ r21145 | mreinhardt@nordita.org | 2013-10-04 21:21:38 +0200 (Fri, 04 Oct 2013) | 2 lines MR: added missing reference to calc_pencils_hydro ------------------------------------------------------------------------ r21144 | mreinhardt@nordita.org | 2013-10-04 21:19:07 +0200 (Fri, 04 Oct 2013) | 3 lines MR: removed definition of njtest and MVAR/MAUX from header (now always to be placed in cparam.local) ------------------------------------------------------------------------ r21143 | mreinhardt@nordita.org | 2013-10-04 21:10:00 +0200 (Fri, 04 Oct 2013) | 3 lines MR: in testfield_after_boundary: removed p from parameter list, introd calculation of ! hydro pencils (restricted); simplified communication ------------------------------------------------------------------------ r21142 | pkapyla | 2013-10-04 19:34:24 +0200 (Fri, 04 Oct 2013) | 2 lines Added z-dependent forcing profile with an x-dependent helicity profile. ------------------------------------------------------------------------ r21140 | joern.warnecke | 2013-10-04 15:05:46 +0200 (Fri, 04 Oct 2013) | 2 lines add new forcing profile: surface_z_stepy ------------------------------------------------------------------------ r21136 | pkapyla | 2013-10-03 18:21:07 +0200 (Thu, 03 Oct 2013) | 2 lines Added new work laptop ------------------------------------------------------------------------ r21135 | joern.warnecke | 2013-10-03 17:54:01 +0200 (Thu, 03 Oct 2013) | 2 lines add temperature output ------------------------------------------------------------------------ r21134 | ccyang@astro.lu.se | 2013-10-03 17:08:10 +0200 (Thu, 03 Oct 2013) | 3 lines Add shear. ------------------------------------------------------------------------ r21133 | ccyang@astro.lu.se | 2013-10-03 15:27:18 +0200 (Thu, 03 Oct 2013) | 3 lines Hand the sheared advection of the B field over to bfield module when it is on. ------------------------------------------------------------------------ r21132 | ccyang@astro.lu.se | 2013-10-03 11:07:02 +0200 (Thu, 03 Oct 2013) | 4 lines Further centralize the calculation of shear velocity, and fix the missing case for lrandomx0=T. ------------------------------------------------------------------------ r21131 | ccyang@astro.lu.se | 2013-10-03 09:56:10 +0200 (Thu, 03 Oct 2013) | 3 lines Add routine get_uy0_shear to share shear velocity. ------------------------------------------------------------------------ r21124 | ccyang@astro.lu.se | 2013-10-02 23:02:46 +0200 (Wed, 02 Oct 2013) | 3 lines Centralize the calculation of shear velocity and do it just once. ------------------------------------------------------------------------ r21120 | wladimir.lyra | 2013-10-01 02:31:16 +0200 (Tue, 01 Oct 2013) | 8 lines Add capability for 1. Non-local isothermal runs (i.e., with entropy) 2. Noise as a fraction of the initial local sound speed 3. Cap magnetic field in the meridional direction ------------------------------------------------------------------------ r21118 | AxelBrandenburg | 2013-09-28 12:28:07 +0200 (Sat, 28 Sep 2013) | 3 lines Ignore consistency of timestamps in snapshots when lreset_tstart=T, in which case we reset all times to tstart. ------------------------------------------------------------------------ r21117 | mreinhardt@nordita.org | 2013-09-28 02:46:57 +0200 (Sat, 28 Sep 2013) | 3 lines MR: changes due to uxbtestmz(mz,... --> uxbtestmz(mz,...; in testfield_after_boundary: pencil calculation corrected, communication simplified ------------------------------------------------------------------------ r21116 | mreinhardt@nordita.org | 2013-09-27 21:29:57 +0200 (Fri, 27 Sep 2013) | 3 lines MR: in testfield_after_boundary: corrected fac, simplified communication, added call to calc_pencils_hydro to enable work with hydro_kinematic (restricted to p%uu) ------------------------------------------------------------------------ r21115 | pkapyla | 2013-09-27 19:48:43 +0200 (Fri, 27 Sep 2013) | 3 lines Use chit_prof1 and chit_prof2 instead of the actual profile in Fgs-boundary, added diagnostics. ------------------------------------------------------------------------ r21114 | mreinhardt@nordita.org | 2013-09-27 19:26:41 +0200 (Fri, 27 Sep 2013) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21113 | mreinhardt@nordita.org | 2013-09-27 18:54:26 +0200 (Fri, 27 Sep 2013) | 2 lines MR: missing calculation of pencils in testfield_after_boundary added ------------------------------------------------------------------------ r21112 | mreinhardt@nordita.org | 2013-09-27 18:35:23 +0200 (Fri, 27 Sep 2013) | 3 lines MR: in testfield_after_boundary: removed p from parameter list, restricted pencil calculation, simplified communication ------------------------------------------------------------------------ r21111 | mreinhardt@nordita.org | 2013-09-27 17:47:32 +0200 (Fri, 27 Sep 2013) | 2 lines MR: communication simplified ------------------------------------------------------------------------ r21110 | mreinhardt@nordita.org | 2013-09-27 16:29:49 +0200 (Fri, 27 Sep 2013) | 2 lines MR: new parameters for nxgrid*nygrid etc. ------------------------------------------------------------------------ r21109 | pkapyla | 2013-09-26 22:08:17 +0200 (Thu, 26 Sep 2013) | 2 lines Corrected diagnostic fviscmxy for lvisc_sqrtrho_nu_const=T and lvisc_rho_nu_const=T. ------------------------------------------------------------------------ r21108 | pkapyla | 2013-09-26 18:18:41 +0200 (Thu, 26 Sep 2013) | 3 lines Added missing term in the sqrtrho-nu-const, diagnostics output, and some comments. ------------------------------------------------------------------------ r21107 | mreinhardt@nordita.org | 2013-09-26 01:06:19 +0200 (Thu, 26 Sep 2013) | 3 lines MR: removed parameter p, restricted calculation of pencil case in testfield_after_boundary ------------------------------------------------------------------------ r21106 | mreinhardt@nordita.org | 2013-09-26 01:00:16 +0200 (Thu, 26 Sep 2013) | 3 lines MR: adapted testfield_after_boundary ------------------------------------------------------------------------ r21105 | mreinhardt@nordita.org | 2013-09-25 23:28:21 +0200 (Wed, 25 Sep 2013) | 2 lines MR: in testfield_after_boundary: parameter p removed, calculation of pencils restricted ------------------------------------------------------------------------ r21104 | mreinhardt@nordita.org | 2013-09-25 23:10:13 +0200 (Wed, 25 Sep 2013) | 2 lines MR: removed parameter p from call of testfield_after_boundary ------------------------------------------------------------------------ r21103 | mreinhardt@nordita.org | 2013-09-25 20:26:03 +0200 (Wed, 25 Sep 2013) | 2 lines MR: intro'd calc_pencils_magnetic_pencpar, calc_pencils_magnetic_std in analogy to hydro ------------------------------------------------------------------------ r21102 | mreinhardt@nordita.org | 2013-09-25 20:18:31 +0200 (Wed, 25 Sep 2013) | 2 lines MR: removed parameter p (pencil case) from subroutine testfield_after_boundary ------------------------------------------------------------------------ r21101 | mreinhardt@nordita.org | 2013-09-25 14:43:36 +0200 (Wed, 25 Sep 2013) | 2 lines MR: removed parameter p of testfield_after_boundary, changed call of calc_pencils_hydro ------------------------------------------------------------------------ r21100 | ccyang@astro.lu.se | 2013-09-23 15:10:58 +0200 (Mon, 23 Sep 2013) | 3 lines Recast the mesh hyper-resistivity into divergence conserving form. ------------------------------------------------------------------------ r21099 | wladimir.lyra | 2013-09-22 05:53:02 +0200 (Sun, 22 Sep 2013) | 4 lines Allow different border profile for different components of the magnetic field. ------------------------------------------------------------------------ r21098 | wladimir.lyra | 2013-09-22 05:52:14 +0200 (Sun, 22 Sep 2013) | 2 lines allow different border profiles for different components of the velocity ------------------------------------------------------------------------ r21097 | wladimir.lyra | 2013-09-22 05:18:38 +0200 (Sun, 22 Sep 2013) | 2 lines Allow for border driving in the meridional coordinate. ------------------------------------------------------------------------ r21096 | mreinhardt@nordita.org | 2013-09-22 00:57:38 +0200 (Sun, 22 Sep 2013) | 2 lines MR: simplified calc_pencils_hydro according to Anders' recommendations ------------------------------------------------------------------------ r21095 | mreinhardt@nordita.org | 2013-09-22 00:52:53 +0200 (Sun, 22 Sep 2013) | 2 lines MR: simplified use of calc_hydro_pencils according to Anders' recommendations ------------------------------------------------------------------------ r21094 | ccyang@astro.lu.se | 2013-09-20 18:52:49 +0200 (Fri, 20 Sep 2013) | 3 lines Add optional argument ignoredx to subroutine curl. ------------------------------------------------------------------------ r21093 | ccyang@astro.lu.se | 2013-09-20 18:51:39 +0200 (Fri, 20 Sep 2013) | 3 lines Add optional argument ignoredx to subroutine der_main. ------------------------------------------------------------------------ r21092 | mreinhardt@nordita.org | 2013-09-20 17:01:47 +0200 (Fri, 20 Sep 2013) | 3 lines MR: index list penc_inds for optional selection of pencils to be calculated in calc_pencils_hydro ------------------------------------------------------------------------ r21091 | mreinhardt@nordita.org | 2013-09-20 16:33:05 +0200 (Fri, 20 Sep 2013) | 3 lines MR: optional indexlist penc_inds introduced in calc_pencils_hydro to enable selective calculation of pencils ------------------------------------------------------------------------ r21090 | mreinhardt@nordita.org | 2013-09-19 21:27:56 +0200 (Thu, 19 Sep 2013) | 2 lines MR: removed equivalence ------------------------------------------------------------------------ r21089 | sven.bingert | 2013-09-19 10:54:24 +0200 (Thu, 19 Sep 2013) | 1 line some cleanup ------------------------------------------------------------------------ r21088 | mreinhardt@nordita.org | 2013-09-19 02:44:27 +0200 (Thu, 19 Sep 2013) | 2 lines MR: corrected uumz -> uumx; lcalc_uumean --> lcalc_uumeanx ------------------------------------------------------------------------ r21087 | mreinhardt@nordita.org | 2013-09-19 02:40:05 +0200 (Thu, 19 Sep 2013) | 3 lines MR: use p%uuu instead of f(l1:l2,m,n,iux:iuz) to enable interaction with hydro_kinematic ------------------------------------------------------------------------ r21086 | mreinhardt@nordita.org | 2013-09-19 02:16:15 +0200 (Thu, 19 Sep 2013) | 2 lines MR: lcalc_aamean --> lcalc_aameanz ------------------------------------------------------------------------ r21085 | mreinhardt@nordita.org | 2013-09-18 18:41:23 +0200 (Wed, 18 Sep 2013) | 2 lines MR: lcalc_aamean --> lcalc_aameanz ------------------------------------------------------------------------ r21084 | mreinhardt@nordita.org | 2013-09-18 18:12:05 +0200 (Wed, 18 Sep 2013) | 2 lines MR: lcalc_aamean --> lcalc_aameanz ------------------------------------------------------------------------ r21083 | mreinhardt@nordita.org | 2013-09-18 18:08:40 +0200 (Wed, 18 Sep 2013) | 2 lines MR: lcalc_aamean --> lcalc_aameanz, lcalc_uumean --> lcalc_uumeanz ------------------------------------------------------------------------ r21082 | AxelBrandenburg | 2013-09-17 23:22:25 +0200 (Tue, 17 Sep 2013) | 2 lines added qp_profile ------------------------------------------------------------------------ r21081 | mreinhardt@nordita.org | 2013-09-17 17:57:00 +0200 (Tue, 17 Sep 2013) | 2 lines MR: finalize_aver introduced ------------------------------------------------------------------------ r21080 | mreinhardt@nordita.org | 2013-09-16 00:59:54 +0200 (Mon, 16 Sep 2013) | 2 lines MR: lcalc_uumean --> lcalc_uumeanz ------------------------------------------------------------------------ r21079 | mreinhardt@nordita.org | 2013-09-16 00:57:29 +0200 (Mon, 16 Sep 2013) | 2 lines MR: lcalc_uumean --> lcalc_uumeanz ------------------------------------------------------------------------ r21078 | mreinhardt@nordita.org | 2013-09-15 00:40:10 +0200 (Sun, 15 Sep 2013) | 2 lines MR: lcalc_uumean --> lcalc_uumeanz ------------------------------------------------------------------------ r21077 | mreinhardt@nordita.org | 2013-09-14 04:43:53 +0200 (Sat, 14 Sep 2013) | 3 lines MR: added mpiallreduce_sum_arr4 for 4D arrays ------------------------------------------------------------------------ r21076 | mreinhardt@nordita.org | 2013-09-14 04:41:07 +0200 (Sat, 14 Sep 2013) | 3 lines MR: generalized finalize_aver ------------------------------------------------------------------------ r21074 | mreinhardt@nordita.org | 2013-09-13 14:57:51 +0200 (Fri, 13 Sep 2013) | 2 lines MR: fixed autotest: no allocate of scalar allowed ------------------------------------------------------------------------ r21073 | nils.e.haugen | 2013-09-13 13:34:12 +0200 (Fri, 13 Sep 2013) | 5 lines Particles continuously inserted must be handled at the very beginning of each main timestep, i.e. the routine should be called from "subroutine particles_timestep_first" - not from "subroutine particles_timestep_second" as it used to be. ------------------------------------------------------------------------ r21072 | pkapyla | 2013-09-13 13:26:58 +0200 (Fri, 13 Sep 2013) | 2 lines Added #(plasmoid) to avoid having FFLAGS_DOUBLE = -O3 as default for Darwin. ------------------------------------------------------------------------ r21071 | mreinhardt@nordita.org | 2013-09-13 03:32:11 +0200 (Fri, 13 Sep 2013) | 2 lines MR: simplified ------------------------------------------------------------------------ r21070 | mreinhardt@nordita.org | 2013-09-13 03:23:37 +0200 (Fri, 13 Sep 2013) | 2 lines MR: bug fixed ------------------------------------------------------------------------ r21069 | mreinhardt@nordita.org | 2013-09-13 02:53:11 +0200 (Fri, 13 Sep 2013) | 4 lines MR: added calculation of means (not yet tested); outsourced find_umax; added optional parameter lpenc in calc_pencils_hydro for possibility to calculate less pencils than are globally requested ------------------------------------------------------------------------ r21068 | mreinhardt@nordita.org | 2013-09-13 01:41:33 +0200 (Fri, 13 Sep 2013) | 2 lines MR: lcalc_uumean --> lcalc_uumeanz ------------------------------------------------------------------------ r21067 | mcnallcp@gmail.com | 2013-09-12 23:53:22 +0200 (Thu, 12 Sep 2013) | 2 lines Make the var.general file contain the platform endianness, instead of a hardcoded string. ------------------------------------------------------------------------ r21066 | mreinhardt@nordita.org | 2013-09-12 23:22:23 +0200 (Thu, 12 Sep 2013) | 3 lines MR: fixed bug ------------------------------------------------------------------------ r21065 | mreinhardt@nordita.org | 2013-09-12 20:09:31 +0200 (Thu, 12 Sep 2013) | 2 lines MR: replaced find_max_fvec for find_umax ------------------------------------------------------------------------ r21064 | mreinhardt@nordita.org | 2013-09-12 19:59:22 +0200 (Thu, 12 Sep 2013) | 2 lines MR: lcalc_uumeanz for lcalc_uumean ------------------------------------------------------------------------ r21063 | mreinhardt@nordita.org | 2013-09-12 19:52:28 +0200 (Thu, 12 Sep 2013) | 2 lines MR: new switch lcalc_uumeanz (synonymous with lcalc_uumean); use of finalize_aver introduced; outsourced find_umax ------------------------------------------------------------------------ r21062 | mreinhardt@nordita.org | 2013-09-12 19:47:28 +0200 (Thu, 12 Sep 2013) | 3 lines MR: outsourced find_max_uu from hydro, added subroutines for finalizing calculation of 1D and 2D averages of a vectorfield ------------------------------------------------------------------------ r21059 | mreinhardt@nordita.org | 2013-09-11 18:36:43 +0200 (Wed, 11 Sep 2013) | 3 lines MR: further change to avoid equivalence ------------------------------------------------------------------------ r21058 | mreinhardt@nordita.org | 2013-09-11 02:40:28 +0200 (Wed, 11 Sep 2013) | 2 lines MR: try to fix the hourly auto-test ------------------------------------------------------------------------ r21057 | nils.e.haugen | 2013-09-10 14:28:31 +0200 (Tue, 10 Sep 2013) | 4 lines When inserting particles continously this should be done only at the first sub-time-step. This bug caused artifacts at processor boundaries. ------------------------------------------------------------------------ r21056 | Bourdin.KIS | 2013-09-10 02:24:16 +0200 (Tue, 10 Sep 2013) | 4 lines This code misinterpreted coor_label='xyz' as 'xy', because the string was truncated to length=2. Fixed another warning about unused variables. Please pay attention to compiler warnings. ------------------------------------------------------------------------ r21055 | Bourdin.KIS | 2013-09-10 02:14:02 +0200 (Tue, 10 Sep 2013) | 2 lines Fixed truncated string. Please don't use hardcoded string lengths, but the pre-defined ones. ------------------------------------------------------------------------ r21054 | Bourdin.KIS | 2013-09-10 02:03:33 +0200 (Tue, 10 Sep 2013) | 2 lines Removed trailing spaces. ------------------------------------------------------------------------ r21053 | mreinhardt@nordita.org | 2013-09-09 16:04:10 +0200 (Mon, 09 Sep 2013) | 3 lines MR: use initialize_testfield_general now ------------------------------------------------------------------------ r21052 | ccyang@astro.lu.se | 2013-09-09 11:11:42 +0200 (Mon, 09 Sep 2013) | 3 lines Put in sanity check for the validity of the dimensions of the grid. ------------------------------------------------------------------------ r21051 | ccyang@astro.lu.se | 2013-09-09 11:06:16 +0200 (Mon, 09 Sep 2013) | 3 lines Do not call the InitialCondition module if it is not plugged in. ------------------------------------------------------------------------ r21050 | mreinhardt@nordita.org | 2013-09-09 04:21:50 +0200 (Mon, 09 Sep 2013) | 2 lines MR: added dependence of testfield_general on magnetic ------------------------------------------------------------------------ r21049 | mreinhardt@nordita.org | 2013-09-09 04:16:21 +0200 (Mon, 09 Sep 2013) | 2 lines MR: fixed bugs ------------------------------------------------------------------------ r21048 | mreinhardt@nordita.org | 2013-09-09 03:53:01 +0200 (Mon, 09 Sep 2013) | 2 lines MR: fixed bug ------------------------------------------------------------------------ r21047 | mreinhardt@nordita.org | 2013-09-09 03:51:28 +0200 (Mon, 09 Sep 2013) | 5 lines MR: derived initialize_testfield_general from testfield_z:initialize_testfield for general stuff; generalized handling of eta profiles to all possible cases: generalized calc_diffusive_part, coded helper routines calc_diffusive_part_prof_* for use with profiles; intro'd use of calc_diffusive_part in rhs_daatest ------------------------------------------------------------------------ r21046 | mreinhardt@nordita.org | 2013-09-09 03:46:55 +0200 (Mon, 09 Sep 2013) | 3 lines MR: intro'd use of initialize_testfield_general ------------------------------------------------------------------------ r21045 | mreinhardt@nordita.org | 2013-09-09 02:19:11 +0200 (Mon, 09 Sep 2013) | 2 lines MR: removed superfluous use statements; outsourced unspecific stuff from initialize_testfield to testfield_general ------------------------------------------------------------------------ r21043 | mreinhardt@nordita.org | 2013-09-08 03:43:05 +0200 (Sun, 08 Sep 2013) | 2 lines MR: added lresi_dep for compatibility ------------------------------------------------------------------------ r21042 | mreinhardt@nordita.org | 2013-09-08 02:12:12 +0200 (Sun, 08 Sep 2013) | 2 lines MR: fix to calm gfortran ------------------------------------------------------------------------ r21041 | mreinhardt@nordita.org | 2013-09-08 01:52:49 +0200 (Sun, 08 Sep 2013) | 3 lines MR: added public :: lresi_dep (could later be protected) ------------------------------------------------------------------------ r21040 | mreinhardt@nordita.org | 2013-09-08 01:51:36 +0200 (Sun, 08 Sep 2013) | 3 lines MR: introduced vector lresi_dep for all possible eta profiles ------------------------------------------------------------------------ r21039 | mreinhardt@nordita.org | 2013-09-08 01:49:50 +0200 (Sun, 08 Sep 2013) | 3 lines MR: introduced vector lresi_dep for all possible eta profiles ------------------------------------------------------------------------ r21038 | mreinhardt@nordita.org | 2013-09-08 01:42:01 +0200 (Sun, 08 Sep 2013) | 3 lines MR: new versions of get_variable and put_variable for 3D and 4D variables; fetch_profile_* for getting profile data added ------------------------------------------------------------------------ r21036 | pkapyla | 2013-09-06 14:05:03 +0200 (Fri, 06 Sep 2013) | 2 lines svn propset ------------------------------------------------------------------------ r21035 | pkapyla | 2013-09-06 13:58:42 +0200 (Fri, 06 Sep 2013) | 2 lines Additional outputs for the solar case. ------------------------------------------------------------------------ r21034 | mreinhardt@nordita.org | 2013-09-05 21:32:38 +0200 (Thu, 05 Sep 2013) | 2 lines MR: removed superfluous statements; adapted to use of outsourced subroutines; new subroutine calc_coeffs as interface for use of calc_coefficients of testfield_xz ------------------------------------------------------------------------ r21033 | mreinhardt@nordita.org | 2013-09-05 21:12:13 +0200 (Thu, 05 Sep 2013) | 3 lines MR: removed superfluous use statements, added only-restrictions; outsourced some subroutines to testfield_general ------------------------------------------------------------------------ r21032 | mreinhardt@nordita.org | 2013-09-05 20:57:44 +0200 (Thu, 05 Sep 2013) | 3 lines MR: added further outsorced subroutines for broader use ------------------------------------------------------------------------ r21031 | mreinhardt@nordita.org | 2013-09-05 20:56:39 +0200 (Thu, 05 Sep 2013) | 3 lines MR: removed/added comments ------------------------------------------------------------------------ r21030 | mreinhardt@nordita.org | 2013-09-05 20:54:59 +0200 (Thu, 05 Sep 2013) | 2 lines MR: removed superfluous variables ------------------------------------------------------------------------ r21029 | mreinhardt@nordita.org | 2013-09-05 20:54:05 +0200 (Thu, 05 Sep 2013) | 2 lines MR: removed superfluous variables ------------------------------------------------------------------------ r21028 | mreinhardt@nordita.org | 2013-09-05 20:52:51 +0200 (Thu, 05 Sep 2013) | 2 lines MR: restricted an informative output to ldebug=T ------------------------------------------------------------------------ r21027 | mreinhardt@nordita.org | 2013-09-05 20:28:06 +0200 (Thu, 05 Sep 2013) | 5 lines MR: intro'd ysum_mn_name_xz_npar, xysum_mn_name_z_npar, zsum_mn_name_xy_mpar, yzsum_mn_name_x_mpar which take n or m not from cdata but from their parameter list for more flexible use; restricted some informative output to ldebug=T ------------------------------------------------------------------------ r21026 | ccyang@astro.lu.se | 2013-09-05 14:45:59 +0200 (Thu, 05 Sep 2013) | 4 lines 1. Only use the eta cofficients to switch on/off the resistivities; 2. Fix the bug of not setting the resistive time constraint at the right place. ------------------------------------------------------------------------ r21025 | pkapyla | 2013-09-05 14:02:27 +0200 (Thu, 05 Sep 2013) | 3 lines If chi_t has a profile, the Fgs boundary condition needs to know about this. ------------------------------------------------------------------------ r21024 | ccyang@astro.lu.se | 2013-09-05 13:43:02 +0200 (Thu, 05 Sep 2013) | 3 lines Change the mechanism of detecting mpicomm vs. nompicomm on runtime. ------------------------------------------------------------------------ r21022 | pkapyla | 2013-09-05 13:17:54 +0200 (Thu, 05 Sep 2013) | 2 lines Compute and print cs2 at the top. ------------------------------------------------------------------------ r21017 | sven.bingert | 2013-09-04 13:13:17 +0200 (Wed, 04 Sep 2013) | 1 line write granules also for other levels ------------------------------------------------------------------------ r21014 | pkapyla | 2013-09-03 14:06:35 +0200 (Tue, 03 Sep 2013) | 3 lines Fixed a bug in the computatoin of the derivative of heat conduction, compatible with nprocx/=1 now. ------------------------------------------------------------------------ r21013 | pkapyla | 2013-09-02 22:31:43 +0200 (Mon, 02 Sep 2013) | 4 lines First iteration of initial condition for spherical convection (previously initialized by running an IDL script and generating the stratification). Currently unsafe for nprocx/=1. ------------------------------------------------------------------------ r21009 | mreinhardt@nordita.org | 2013-08-30 15:53:27 +0200 (Fri, 30 Aug 2013) | 2 lines MR: made parameter bij of gij_etc optional; added error messages for misssing optional parameters ------------------------------------------------------------------------ r21008 | pkapyla | 2013-08-30 10:07:44 +0200 (Fri, 30 Aug 2013) | 3 lines Added experimental routine to remove accumulation of angular momentum due to numerical reasons in spherical coordinates. ------------------------------------------------------------------------ r21007 | ccyang@astro.lu.se | 2013-08-29 20:34:45 +0200 (Thu, 29 Aug 2013) | 3 lines Share variable B_ext. ------------------------------------------------------------------------ r21006 | ccyang@astro.lu.se | 2013-08-29 20:25:28 +0200 (Thu, 29 Aug 2013) | 3 lines Add dummy pencil aa. ------------------------------------------------------------------------ r21005 | ccyang@astro.lu.se | 2013-08-29 18:41:21 +0200 (Thu, 29 Aug 2013) | 3 lines Add new parameter lbfield to identify different magnetic variables. ------------------------------------------------------------------------ r21004 | AxelBrandenburg | 2013-08-29 18:10:41 +0200 (Thu, 29 Aug 2013) | 2 lines Added heating with Gaussian profile ------------------------------------------------------------------------ r21003 | AxelBrandenburg | 2013-08-29 14:21:47 +0200 (Thu, 29 Aug 2013) | 3 lines in radiation_ray.f90, removed debug comments in forcing.f90, renamed dforce to dtforce in one routine. ------------------------------------------------------------------------ r21001 | pkapyla | 2013-08-28 16:47:34 +0200 (Wed, 28 Aug 2013) | 2 lines Added diagnostics ------------------------------------------------------------------------ r21000 | sven.bingert | 2013-08-28 11:55:41 +0200 (Wed, 28 Aug 2013) | 1 line removed superfluous variable and trailing whitespaces ------------------------------------------------------------------------ r20999 | sven.bingert | 2013-08-28 11:54:31 +0200 (Wed, 28 Aug 2013) | 1 line removed everything related to the heatflux vector, this will be done in an additional module ------------------------------------------------------------------------ r20998 | pkapyla | 2013-08-28 10:53:57 +0200 (Wed, 28 Aug 2013) | 2 lines Adopted calc_inverse_matrix from testfield_xz, otherwise minor changes. ------------------------------------------------------------------------ r20997 | mreinhardt@nordita.org | 2013-08-28 03:20:27 +0200 (Wed, 28 Aug 2013) | 2 lines MR: removed unneeded calculations in testfield-generating routines ------------------------------------------------------------------------ r20996 | mreinhardt@nordita.org | 2013-08-28 02:52:53 +0200 (Wed, 28 Aug 2013) | 2 lines MR: outsourced calculation of inverse matrix from initialize_testfield into calc_inverse_matrix for reuse in testfield_xy ------------------------------------------------------------------------ r20995 | mreinhardt@nordita.org | 2013-08-27 21:11:11 +0200 (Tue, 27 Aug 2013) | 2 lines MR: reinstated 0p setting if formats from print.in ------------------------------------------------------------------------ r20994 | pkapyla | 2013-08-27 21:07:08 +0200 (Tue, 27 Aug 2013) | 3 lines Resolved bus error but still not sure if correct. Matthias & Axel, take a look. ------------------------------------------------------------------------ r20993 | mreinhardt@nordita.org | 2013-08-27 20:45:42 +0200 (Tue, 27 Aug 2013) | 3 lines MR: changes for use of testfield_general: moved input parameters of general importance, deleted doubled routines, moved calc_diffusive_part; changes for iterative procedure/complex calculation; removed unnecessary output into index.pro ------------------------------------------------------------------------ r20992 | mreinhardt@nordita.org | 2013-08-27 20:44:20 +0200 (Tue, 27 Aug 2013) | 2 lines MR: moved more input parameters of general importance and subroutine calc_diffusive_part from testfield_z to here ------------------------------------------------------------------------ r20991 | mreinhardt@nordita.org | 2013-08-27 20:40:14 +0200 (Tue, 27 Aug 2013) | 2 lines MR: added/removed comments ------------------------------------------------------------------------ r20990 | pkapyla | 2013-08-27 19:28:45 +0200 (Tue, 27 Aug 2013) | 2 lines Matthias, please check. ------------------------------------------------------------------------ r20989 | mreinhardt@nordita.org | 2013-08-27 17:11:43 +0200 (Tue, 27 Aug 2013) | 2 lines MR: added a comment ------------------------------------------------------------------------ r20988 | mreinhardt@nordita.org | 2013-08-27 16:58:40 +0200 (Tue, 27 Aug 2013) | 2 lines MR: added finalization of imaginary 0D diagnostics ------------------------------------------------------------------------ r20987 | mreinhardt@nordita.org | 2013-08-27 16:57:23 +0200 (Tue, 27 Aug 2013) | 4 lines MR: changed initialize_prints into initialize_diagnostics; moved calculation of dVol_rel1 to initialize_diagnostics; optional switch lcomplex in diagnostic for use with imaginary parts; removed unneeded 0p specifications from format generation ------------------------------------------------------------------------ r20986 | mreinhardt@nordita.org | 2013-08-27 16:43:50 +0200 (Tue, 27 Aug 2013) | 3 lines MR: added optional default value in loptest ------------------------------------------------------------------------ r20985 | pkapyla | 2013-08-27 16:39:02 +0200 (Tue, 27 Aug 2013) | 2 lines Replaced n1 -> m1, n2-> m2, and nl -> ml in several places ------------------------------------------------------------------------ r20984 | AxelBrandenburg | 2013-08-27 16:20:21 +0200 (Tue, 27 Aug 2013) | 1 line corrected typo lwr -> lwrite ------------------------------------------------------------------------ r20982 | pkapyla | 2013-08-27 16:15:19 +0200 (Tue, 27 Aug 2013) | 2 lines First iteration of testfield_xy (copied from testfield_xz). ------------------------------------------------------------------------ r20981 | mreinhardt@nordita.org | 2013-08-27 03:05:26 +0200 (Tue, 27 Aug 2013) | 2 lines MR: changed operator .INDAT. into .IN. ------------------------------------------------------------------------ r20980 | mreinhardt@nordita.org | 2013-08-27 03:04:05 +0200 (Tue, 27 Aug 2013) | 2 lines MR: changed operator .INDAT. into .IN. ------------------------------------------------------------------------ r20979 | mreinhardt@nordita.org | 2013-08-27 02:54:55 +0200 (Tue, 27 Aug 2013) | 3 lines MR: uneeded output of idiag* removed ------------------------------------------------------------------------ r20978 | mreinhardt@nordita.org | 2013-08-26 21:31:15 +0200 (Mon, 26 Aug 2013) | 3 lines MR: modifications for uncounted comment lines in read_name_format; introduced use of parameter comchars when reading print.in to avoid counting comment lines ------------------------------------------------------------------------ r20977 | mreinhardt@nordita.org | 2013-08-26 21:17:34 +0200 (Mon, 26 Aug 2013) | 2 lines MR: returned to complex*16 in mpibcast_cmplx_arr although this is wrong for gfortran -std=f95 ------------------------------------------------------------------------ r20976 | mreinhardt@nordita.org | 2013-08-26 20:53:58 +0200 (Mon, 26 Aug 2013) | 2 lines MR: added dependency of Syscalls on General because use of .INDAT. ------------------------------------------------------------------------ r20975 | mreinhardt@nordita.org | 2013-08-26 20:49:07 +0200 (Mon, 26 Aug 2013) | 3 lines MR: optional parameter comchars added in parallel_count_lines ------------------------------------------------------------------------ r20974 | mreinhardt@nordita.org | 2013-08-26 20:47:17 +0200 (Mon, 26 Aug 2013) | 3 lines MR: optional parameter comchars added in parallel_count_lines ------------------------------------------------------------------------ r20973 | mreinhardt@nordita.org | 2013-08-26 20:44:51 +0200 (Mon, 26 Aug 2013) | 3 lines MR: operator .INDAT. moved to general; unneeded p format descriptors removed ------------------------------------------------------------------------ r20972 | mreinhardt@nordita.org | 2013-08-26 20:41:57 +0200 (Mon, 26 Aug 2013) | 3 lines MR: operator .INDAT. moved here from sub ------------------------------------------------------------------------ r20971 | mreinhardt@nordita.org | 2013-08-26 20:40:44 +0200 (Mon, 26 Aug 2013) | 3 lines MR: new optional parameter in count_lines for possibility to ignore comment lines ------------------------------------------------------------------------ r20969 | mreinhardt@nordita.org | 2013-08-25 22:52:49 +0200 (Sun, 25 Aug 2013) | 3 lines MR: changes for now dynamically allocated itype_name; uncommented lines which causes error before because of inconsistent lengths of fname and itype_name ------------------------------------------------------------------------ r20968 | mreinhardt@nordita.org | 2013-08-25 22:49:35 +0200 (Sun, 25 Aug 2013) | 2 lines MR: changed global_mean to adhere to FORTRAN 95 ------------------------------------------------------------------------ r20967 | mreinhardt@nordita.org | 2013-08-25 22:40:03 +0200 (Sun, 25 Aug 2013) | 3 lines MR: made itype_name allocatable (as it corresponds to fname etc.) ------------------------------------------------------------------------ r20966 | mreinhardt@nordita.org | 2013-08-25 22:38:22 +0200 (Sun, 25 Aug 2013) | 3 lines MR: simplified calls of save_name_sound ------------------------------------------------------------------------ r20965 | sven.bingert | 2013-08-25 10:58:55 +0200 (Sun, 25 Aug 2013) | 1 line changed the file name for the seeds and the attributes of the granules ------------------------------------------------------------------------ r20963 | mreinhardt@nordita.org | 2013-08-24 21:31:32 +0200 (Sat, 24 Aug 2013) | 3 lines MR: a revert ------------------------------------------------------------------------ r20962 | mreinhardt@nordita.org | 2013-08-24 17:15:23 +0200 (Sat, 24 Aug 2013) | 2 lines MR: another try ------------------------------------------------------------------------ r20961 | mreinhardt@nordita.org | 2013-08-24 16:41:42 +0200 (Sat, 24 Aug 2013) | 3 lines MR: a further iteration ------------------------------------------------------------------------ r20960 | mreinhardt@nordita.org | 2013-08-24 16:27:45 +0200 (Sat, 24 Aug 2013) | 2 lines MR: change to calm gfortran on norlx1 ------------------------------------------------------------------------ r20959 | ccyang@astro.lu.se | 2013-08-24 13:24:29 +0200 (Sat, 24 Aug 2013) | 4 lines 1. Straighten out the implicit vs. explicit switch for normal and shock resistivities. 2. Prevent an Energy module to use this module when Ohmic heating, which is not implemented yet, should be present. ------------------------------------------------------------------------ r20957 | ccyang@astro.lu.se | 2013-08-24 13:11:43 +0200 (Sat, 24 Aug 2013) | 3 lines Clean up the implicit resistivity algorithm and migrate to using ImplicitDiffusion module. ------------------------------------------------------------------------ r20956 | ccyang@astro.lu.se | 2013-08-23 22:45:51 +0200 (Fri, 23 Aug 2013) | 3 lines Prevent an Energy module to use implicit viscous update before viscous heating with it is implemented. ------------------------------------------------------------------------ r20955 | mreinhardt@nordita.org | 2013-08-23 20:21:07 +0200 (Fri, 23 Aug 2013) | 2 lines MR: reverted the last changes; changed sum_mn_name_cmplx into sum_mn_name_arr2; some more preparations for complex output ------------------------------------------------------------------------ r20954 | AxelBrandenburg | 2013-08-23 19:52:39 +0200 (Fri, 23 Aug 2013) | 2 lines temporary checkin to check something ------------------------------------------------------------------------ r20953 | mreinhardt@nordita.org | 2013-08-23 17:28:25 +0200 (Fri, 23 Aug 2013) | 3 lines MR: made *optest public ------------------------------------------------------------------------ r20952 | mreinhardt@nordita.org | 2013-08-23 16:33:40 +0200 (Fri, 23 Aug 2013) | 2 lines MR: fixed a typo ------------------------------------------------------------------------ r20951 | mreinhardt@nordita.org | 2013-08-23 14:59:47 +0200 (Fri, 23 Aug 2013) | 6 lines MR: try s line, and those below, will be ignored-- M diagnostics.f90 ------------------------------------------------------------------------ r20950 | mreinhardt@nordita.org | 2013-08-23 14:51:39 +0200 (Fri, 23 Aug 2013) | 2 lines MR: adjustments in calls to sum_mn_name (lines 349,352). Wlad, please check! ------------------------------------------------------------------------ r20949 | mreinhardt@nordita.org | 2013-08-23 03:34:40 +0200 (Fri, 23 Aug 2013) | 3 lines MR: fixed bug ------------------------------------------------------------------------ r20948 | mreinhardt@nordita.org | 2013-08-23 02:53:04 +0200 (Fri, 23 Aug 2013) | 2 lines MR: a try to calm gfortran on norlx51 ------------------------------------------------------------------------ r20947 | mreinhardt@nordita.org | 2013-08-23 01:51:29 +0200 (Fri, 23 Aug 2013) | 2 lines MR: changes of calls of sum_mn_name in lines 1212,1215,1216 for use with generic call, anders, please check! ------------------------------------------------------------------------ r20946 | mreinhardt@nordita.org | 2013-08-23 01:46:07 +0200 (Fri, 23 Aug 2013) | 3 lines MR: fixed bugs ------------------------------------------------------------------------ r20945 | mreinhardt@nordita.org | 2013-08-23 00:26:01 +0200 (Fri, 23 Aug 2013) | 2 lines MR: global_mean now a subroutine to calm down gfortran ------------------------------------------------------------------------ r20944 | mreinhardt@nordita.org | 2013-08-22 23:32:28 +0200 (Thu, 22 Aug 2013) | 2 lines MR: another try to overcome the internal compiler error ------------------------------------------------------------------------ r20943 | mreinhardt@nordita.org | 2013-08-22 22:08:58 +0200 (Thu, 22 Aug 2013) | 2 lines MR: fixed cause for internal compiler error ------------------------------------------------------------------------ r20942 | mreinhardt@nordita.org | 2013-08-22 21:43:51 +0200 (Thu, 22 Aug 2013) | 2 lines MR: use optest ------------------------------------------------------------------------ r20941 | mreinhardt@nordita.org | 2013-08-22 21:43:01 +0200 (Thu, 22 Aug 2013) | 2 lines MR: use optest ------------------------------------------------------------------------ r20940 | mreinhardt@nordita.org | 2013-08-22 21:42:13 +0200 (Thu, 22 Aug 2013) | 2 lines MR: moved calc_uxb to here from testfield_z ------------------------------------------------------------------------ r20939 | mreinhardt@nordita.org | 2013-08-22 21:38:22 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used ------------------------------------------------------------------------ r20938 | mreinhardt@nordita.org | 2013-08-22 21:36:57 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used ------------------------------------------------------------------------ r20937 | mreinhardt@nordita.org | 2013-08-22 21:34:58 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used; unnecessary output into index.pro removed ------------------------------------------------------------------------ r20936 | mreinhardt@nordita.org | 2013-08-22 21:32:14 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used; unnecessary output into index.pro removed ------------------------------------------------------------------------ r20935 | mreinhardt@nordita.org | 2013-08-22 21:28:43 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used ------------------------------------------------------------------------ r20934 | mreinhardt@nordita.org | 2013-08-22 21:27:54 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest used ------------------------------------------------------------------------ r20933 | mreinhardt@nordita.org | 2013-08-22 21:23:21 +0200 (Thu, 22 Aug 2013) | 2 lines MR: optest introduced ------------------------------------------------------------------------ r20932 | mreinhardt@nordita.org | 2013-08-22 21:08:44 +0200 (Thu, 22 Aug 2013) | 2 lines MR: function doptest added ------------------------------------------------------------------------ r20931 | mreinhardt@nordita.org | 2013-08-22 21:05:26 +0200 (Thu, 22 Aug 2013) | 3 lines MR: bug fixed ------------------------------------------------------------------------ r20930 | mreinhardt@nordita.org | 2013-08-22 20:58:43 +0200 (Thu, 22 Aug 2013) | 2 lines MR: new versions of sum_mn_name for real and complex output, modifications of gen_form_legend and prints for complex output ------------------------------------------------------------------------ r20929 | mreinhardt@nordita.org | 2013-08-22 20:54:51 +0200 (Thu, 22 Aug 2013) | 2 lines MR: workaround for non-type-conforming use of sum_mn_name ------------------------------------------------------------------------ r20928 | mreinhardt@nordita.org | 2013-08-22 20:52:50 +0200 (Thu, 22 Aug 2013) | 3 lines MR: new routines *optest to check for an optional parameter and setting default, insert* for inserting in a vector, global_mean; modification of noform for complex output ------------------------------------------------------------------------ r20926 | ccyang@astro.lu.se | 2013-08-22 20:11:10 +0200 (Thu, 22 Aug 2013) | 3 lines Plug module ImplicitDiffusion into module Viscosity. ------------------------------------------------------------------------ r20925 | ccyang@astro.lu.se | 2013-08-22 20:09:18 +0200 (Thu, 22 Aug 2013) | 3 lines Remove variable NOSPECIAL_OBJ. ------------------------------------------------------------------------ r20921 | sven.bingert | 2013-08-22 10:10:00 +0200 (Thu, 22 Aug 2013) | 1 line added keyword to apply heating when using hyper diffusion ------------------------------------------------------------------------ r20920 | ccyang@astro.lu.se | 2013-08-21 22:47:18 +0200 (Wed, 21 Aug 2013) | 3 lines Fix a bug in subroutine transp_xz. ------------------------------------------------------------------------ r20919 | ccyang@astro.lu.se | 2013-08-21 21:51:20 +0200 (Wed, 21 Aug 2013) | 3 lines Plug the ImplicitDiffusion module in. ------------------------------------------------------------------------ r20918 | ccyang@astro.lu.se | 2013-08-21 21:49:47 +0200 (Wed, 21 Aug 2013) | 3 lines Change the interface of the external procedure get_diffus_coeff. ------------------------------------------------------------------------ r20917 | ccyang@astro.lu.se | 2013-08-21 18:01:07 +0200 (Wed, 21 Aug 2013) | 3 lines Missing subroutine import. ------------------------------------------------------------------------ r20915 | mreinhardt@nordita.org | 2013-08-21 14:14:59 +0200 (Wed, 21 Aug 2013) | 2 lines MR: new ilabel for flagging complex diagnostics ------------------------------------------------------------------------ r20914 | sven.bingert | 2013-08-21 09:58:49 +0200 (Wed, 21 Aug 2013) | 1 line added (grid independent) hyper diffusion with constant Reynoldsnumber ------------------------------------------------------------------------ r20913 | sven.bingert | 2013-08-21 09:46:16 +0200 (Wed, 21 Aug 2013) | 1 line minor change in the comment ------------------------------------------------------------------------ r20912 | sven.bingert | 2013-08-21 09:45:40 +0200 (Wed, 21 Aug 2013) | 1 line made dxmax_pencil available also in equidistant case, needed for both diagnostic variables mesh and shock Reynoldsnumber ------------------------------------------------------------------------ r20911 | wladimir.lyra | 2013-08-20 23:26:10 +0200 (Tue, 20 Aug 2013) | 5 lines Added a y-dependent resistivity profile. Also, allow for different widths in the [xyz] resistivity transitions. These should be eta_[xyz]width. The default is eta_width being set to eta_zwidth. ------------------------------------------------------------------------ r20908 | sven.bingert | 2013-08-20 16:39:16 +0200 (Tue, 20 Aug 2013) | 1 line no need to have bbb as pencil, prevents from compiling whit nomagnetic ------------------------------------------------------------------------ r20907 | mcnallcp@gmail.com | 2013-08-19 22:14:27 +0200 (Mon, 19 Aug 2013) | 3 lines Add better comment to shock_cloud IC file MM shock_cloud.f90 ------------------------------------------------------------------------ r20906 | mreinhardt@nordita.org | 2013-08-19 20:55:56 +0200 (Mon, 19 Aug 2013) | 2 lines MR: changes for use of fname_keep for accumulating diagnostics ------------------------------------------------------------------------ r20905 | mreinhardt@nordita.org | 2013-08-19 20:54:51 +0200 (Mon, 19 Aug 2013) | 3 lines MR: intro'd array fname_keep for accumulating diagnostics ------------------------------------------------------------------------ r20904 | ccyang@astro.lu.se | 2013-08-19 19:34:55 +0200 (Mon, 19 Aug 2013) | 3 lines Remove the argument direction to get_diffus_coeff for the moment. ------------------------------------------------------------------------ r20903 | mcnallcp@gmail.com | 2013-08-19 19:04:26 +0200 (Mon, 19 Aug 2013) | 4 lines IC for NBIA PhD A shock_cloud.f90 ------------------------------------------------------------------------ r20901 | ccyang@astro.lu.se | 2013-08-19 17:24:53 +0200 (Mon, 19 Aug 2013) | 3 lines Add module ImplicitDiffusion to provide a general facility to implicitly integrate diffusion terms. ------------------------------------------------------------------------ r20900 | ccyang@astro.lu.se | 2013-08-19 17:15:28 +0200 (Mon, 19 Aug 2013) | 3 lines Import Cparam module. ------------------------------------------------------------------------ r20899 | ccyang@astro.lu.se | 2013-08-19 17:10:56 +0200 (Mon, 19 Aug 2013) | 3 lines Set dependencies of bfield.o explicitly. ------------------------------------------------------------------------ r20898 | nils.e.haugen@gmail.com | 2013-08-19 13:05:32 +0200 (Mon, 19 Aug 2013) | 2 lines Freeze also the temperature in the frozen zone. ------------------------------------------------------------------------ r20897 | ccyang@astro.lu.se | 2013-08-18 22:02:50 +0200 (Sun, 18 Aug 2013) | 3 lines Add the call to the InitialCondition module. ------------------------------------------------------------------------ r20893 | mreinhardt@nordita.org | 2013-08-18 01:41:32 +0200 (Sun, 18 Aug 2013) | 2 lines MR: changed for use with testfield_general ------------------------------------------------------------------------ r20892 | wladimir.lyra | 2013-08-16 19:58:59 +0200 (Fri, 16 Aug 2013) | 4 lines Change in calc_heat_cool_variable (heating with power-law changing cooling time). If lborder_heat_variable is false (default), pborder was never set (or set to zero), which tthen was shutting down the cooling, making the run essentially adiabatic. ------------------------------------------------------------------------ r20889 | mreinhardt@nordita.org | 2013-08-15 19:40:36 +0200 (Thu, 15 Aug 2013) | 2 lines MR: fixed a bug ------------------------------------------------------------------------ r20888 | mreinhardt@nordita.org | 2013-08-15 19:40:01 +0200 (Thu, 15 Aug 2013) | 2 lines MR: fixed a bug ------------------------------------------------------------------------ r20887 | mreinhardt@nordita.org | 2013-08-15 19:38:59 +0200 (Thu, 15 Aug 2013) | 2 lines MR: fixed a bug ------------------------------------------------------------------------ r20883 | mreinhardt@nordita.org | 2013-08-14 17:50:12 +0200 (Wed, 14 Aug 2013) | 3 lines MR: removed outdated comment ------------------------------------------------------------------------ r20882 | mreinhardt@nordita.org | 2013-08-14 17:46:06 +0200 (Wed, 14 Aug 2013) | 2 lines MR: removed unnecessary output of idiags into index.pro ------------------------------------------------------------------------ r20880 | nils.e.haugen | 2013-08-14 13:46:08 +0200 (Wed, 14 Aug 2013) | 2 lines Let particles_main depend on particles_dragforce ------------------------------------------------------------------------ r20877 | ccyang@astro.lu.se | 2013-08-13 21:15:25 +0200 (Tue, 13 Aug 2013) | 3 lines Fix the override of r20651 by r20876. ------------------------------------------------------------------------ r20876 | mreinhardt@nordita.org | 2013-08-13 18:52:39 +0200 (Tue, 13 Aug 2013) | 2 lines MR: changes for use of testfield_general (used in testfield_xz only at the moment) ------------------------------------------------------------------------ r20875 | mreinhardt@nordita.org | 2013-08-13 18:47:20 +0200 (Tue, 13 Aug 2013) | 3 lines MR: moved subroutine init_aatest to testfield_general, corrected calculation of uufluct, removed unneeded output of idiags into index.pro ------------------------------------------------------------------------ r20874 | mreinhardt@nordita.org | 2013-08-13 18:44:11 +0200 (Tue, 13 Aug 2013) | 2 lines MR: built in subroutine init_aatest ------------------------------------------------------------------------ r20873 | ccyang@astro.lu.se | 2013-08-13 17:58:05 +0200 (Tue, 13 Aug 2013) | 3 lines Remove chi_shock_gradTT facility. ------------------------------------------------------------------------ r20871 | iomsn1 | 2013-08-10 16:56:40 +0200 (Sat, 10 Aug 2013) | 2 lines Added option for internal twist. ------------------------------------------------------------------------ r20870 | Bourdin.KIS | 2013-08-10 14:42:49 +0200 (Sat, 10 Aug 2013) | 2 lines Should fix the "helical-MHDturb" auto-test. ------------------------------------------------------------------------ r20869 | anders@astro.lu.se | 2013-08-08 18:22:55 +0200 (Thu, 08 Aug 2013) | 2 lines Corrected call to keep_compiler_quiet. ------------------------------------------------------------------------ r20868 | anders@astro.lu.se | 2013-08-08 15:10:00 +0200 (Thu, 08 Aug 2013) | 2 lines Added call to k-means algorithm in particles adaptation module. ------------------------------------------------------------------------ r20867 | anders@astro.lu.se | 2013-08-08 14:24:49 +0200 (Thu, 08 Aug 2013) | 2 lines Fatal error if called. ------------------------------------------------------------------------ r20866 | anders@astro.lu.se | 2013-08-08 12:28:55 +0200 (Thu, 08 Aug 2013) | 2 lines Added dummy version of k-means algorithm. ------------------------------------------------------------------------ r20865 | anders@astro.lu.se | 2013-08-08 12:28:13 +0200 (Thu, 08 Aug 2013) | 2 lines Added infrastructure for k means algorithm for particle adaptation. ------------------------------------------------------------------------ r20864 | anders@astro.lu.se | 2013-08-08 12:04:56 +0200 (Thu, 08 Aug 2013) | 2 lines Register particle velocity field as a communicated aux. ------------------------------------------------------------------------ r20853 | anders@astro.lu.se | 2013-08-07 13:47:46 +0200 (Wed, 07 Aug 2013) | 2 lines Map xxp and vvp to grid before particle adaptation. ------------------------------------------------------------------------ r20852 | anders@astro.lu.se | 2013-08-07 12:28:47 +0200 (Wed, 07 Aug 2013) | 3 lines Worked on a new adaptation method where the new particle velocity is interpolated from the assigned velocity field. ------------------------------------------------------------------------ r20849 | anders@astro.lu.se | 2013-08-06 20:45:43 +0200 (Tue, 06 Aug 2013) | 2 lines Renamed some overlong initial conditions. ------------------------------------------------------------------------ r20848 | anders@astro.lu.se | 2013-08-06 20:45:07 +0200 (Tue, 06 Aug 2013) | 2 lines Only adapt particle number after the last sub-time-step. ------------------------------------------------------------------------ r20847 | anders@astro.lu.se | 2013-08-06 20:35:27 +0200 (Tue, 06 Aug 2013) | 3 lines Place particles randomly in cell when adapting their number. Still does not work properly. ------------------------------------------------------------------------ r20841 | ccyang@astro.lu.se | 2013-08-05 17:19:26 +0200 (Mon, 05 Aug 2013) | 3 lines Modularized skeleton and a rough random method. Debugging is still required. ------------------------------------------------------------------------ r20835 | wladimir.lyra | 2013-08-03 09:24:16 +0200 (Sat, 03 Aug 2013) | 5 lines personal initial condition: added the effect of magnetic pressure support in the density vertical stratification. minor correcti ------------------------------------------------------------------------ r20834 | wladimir.lyra | 2013-08-03 09:22:02 +0200 (Sat, 03 Aug 2013) | 2 lines Added constant 2nd derivative boundary for y, and constant power law boundary. ------------------------------------------------------------------------ r20831 | ccyang@astro.lu.se | 2013-07-31 16:21:00 +0200 (Wed, 31 Jul 2013) | 3 lines Dynamical diffusion in sub-time steps, instead of full time step. ------------------------------------------------------------------------ r20830 | ccyang@astro.lu.se | 2013-07-31 15:58:43 +0200 (Wed, 31 Jul 2013) | 3 lines bfield Magnetic module depends on Grid. ------------------------------------------------------------------------ r20828 | AxelBrandenburg | 2013-07-30 20:39:24 +0200 (Tue, 30 Jul 2013) | 1 line fixes the 2 auto-test problems of the last 23 hours ------------------------------------------------------------------------ r20827 | wladimir.lyra | 2013-07-29 20:40:20 +0200 (Mon, 29 Jul 2013) | 9 lines As in magnetic, calculate the rhs for each version of the continuity equation, and add it in the end, instead of writing >60 times df = df + expression. Makes debugging easier and it's more readable. ------------------------------------------------------------------------ r20826 | AxelBrandenburg | 2013-07-26 20:48:24 +0200 (Fri, 26 Jul 2013) | 2 lines corrected bug with using Fgs boundary condition ------------------------------------------------------------------------ r20825 | NBabkovskaia | 2013-07-26 19:06:53 +0200 (Fri, 26 Jul 2013) | 6 lines fixed auto-test -This line, and those below, will be ignored-- M dustdensity.f90 ------------------------------------------------------------------------ r20817 | boris.dintrans | 2013-07-23 11:09:50 +0200 (Tue, 23 Jul 2013) | 3 lines rho0 is used in the mixinglength setup ------------------------------------------------------------------------ r20816 | wladimir.lyra | 2013-07-23 00:33:09 +0200 (Tue, 23 Jul 2013) | 5 lines swap fatal_error for stop_fatal in unmap_other ------------------------------------------------------------------------ r20815 | wladimir.lyra | 2013-07-22 20:36:28 +0200 (Mon, 22 Jul 2013) | 4 lines Break if nxgrid/=nygrid for unmap_other (it was assuming nxgrid=nygrid) ------------------------------------------------------------------------ r20809 | wladimir.lyra | 2013-07-22 08:11:39 +0200 (Mon, 22 Jul 2013) | 4 lines Fixed problem with global disk poisson solver in parallel. ------------------------------------------------------------------------ r20808 | wladimir.lyra | 2013-07-22 08:10:48 +0200 (Mon, 22 Jul 2013) | 2 lines Cosmetic (plus a debug line) ------------------------------------------------------------------------ r20806 | AxelBrandenburg | 2013-07-19 18:25:33 +0200 (Fri, 19 Jul 2013) | 4 lines added new routine called hfluxlayer_y_theta which produces a theta function for the magnetic field. It is positive below z=0 and zero above. ------------------------------------------------------------------------ r20805 | sven.bingert | 2013-07-19 08:44:20 +0200 (Fri, 19 Jul 2013) | 1 line minor coding issue ------------------------------------------------------------------------ r20804 | wladimir.lyra | 2013-07-19 04:59:37 +0200 (Fri, 19 Jul 2013) | 4 lines Added particle's torques to the torque diagnostic. ------------------------------------------------------------------------ r20803 | wladimir.lyra | 2013-07-19 00:26:28 +0200 (Fri, 19 Jul 2013) | 4 lines Add structure for particle torque on planet. ------------------------------------------------------------------------ r20796 | AxelBrandenburg | 2013-07-14 14:23:59 +0200 (Sun, 14 Jul 2013) | 2 lines made vtube also Cartesian, but this works only for non-periodic boundary conditions in x and y, and added vtube-peri as a somewhat primitive replacement for that case. ------------------------------------------------------------------------ r20794 | Bourdin.KIS | 2013-07-14 13:18:19 +0200 (Sun, 14 Jul 2013) | 2 lines Fortran95 "write" doesn't interprete '\n' as newline. Made warning a bit better visible in this large amout of regular output. ------------------------------------------------------------------------ r20793 | boris.dintrans | 2013-07-14 11:47:22 +0200 (Sun, 14 Jul 2013) | 3 lines added a l1st flag in bc_force_ux_time ------------------------------------------------------------------------ r20790 | sven.bingert | 2013-07-12 11:55:09 +0200 (Fri, 12 Jul 2013) | 1 line coding style, removed warnings ------------------------------------------------------------------------ r20789 | sven.bingert | 2013-07-12 11:38:04 +0200 (Fri, 12 Jul 2013) | 1 line removed waring by commenting out a variable ------------------------------------------------------------------------ r20788 | sven.bingert | 2013-07-12 11:35:57 +0200 (Fri, 12 Jul 2013) | 1 line removed superfluous variables, empty lines, and trailing white spaces ------------------------------------------------------------------------ r20786 | wladimir.lyra | 2013-07-10 22:36:25 +0200 (Wed, 10 Jul 2013) | 4 lines Ouch, stupid mistake. Serial x is nprocx==1, not nxgrid==1. Should fix the auto-tets. ------------------------------------------------------------------------ r20785 | AxelBrandenburg | 2013-07-10 21:42:57 +0200 (Wed, 10 Jul 2013) | 2 lines lmeanfield_chitB should only be asked if lmagnetic. ------------------------------------------------------------------------ r20784 | wladimir.lyra | 2013-07-10 11:53:10 +0200 (Wed, 10 Jul 2013) | 2 lines Ops, I seem to have left the h file out the commit. ------------------------------------------------------------------------ r20783 | wladimir.lyra | 2013-07-10 07:35:33 +0200 (Wed, 10 Jul 2013) | 6 lines Quick-and-dirty patch for fourier transform in 2D x-parallel for dimension other than nxgrid. Compiles and runs, but still needs debugging. Gotta check in because Alex (grad student I'm working with) needs it. Will 'prettify' it after debugged (promise). ------------------------------------------------------------------------ r20782 | wladimir.lyra | 2013-07-10 06:25:50 +0200 (Wed, 10 Jul 2013) | 6 lines Poisson solver for Cartesian global disks: Brought the book-keeping up to date with x-parallelization. Still needs a fourier transform routine in x-parallel to replace fourier_transform_xy_xy_other. ------------------------------------------------------------------------ r20781 | ccyang@astro.lu.se | 2013-07-09 18:04:02 +0200 (Tue, 09 Jul 2013) | 3 lines Add mesh hyper-resistivity, unfortunately a divergence generator. This is to be worked on later. ------------------------------------------------------------------------ r20776 | Bourdin.KIS | 2013-07-06 23:43:28 +0200 (Sat, 06 Jul 2013) | 2 lines Resolved warning about same argument used for intent(in) and intent(out). ------------------------------------------------------------------------ r20775 | Bourdin.KIS | 2013-07-06 23:41:47 +0200 (Sat, 06 Jul 2013) | 2 lines Removed double declaration of 'ugu' pencil. ------------------------------------------------------------------------ r20774 | Bourdin.KIS | 2013-07-06 23:40:13 +0200 (Sat, 06 Jul 2013) | 2 lines Removed unused variable. ------------------------------------------------------------------------ r20773 | Bourdin.KIS | 2013-07-06 23:39:02 +0200 (Sat, 06 Jul 2013) | 2 lines Removed unused variable. ------------------------------------------------------------------------ r20772 | Bourdin.KIS | 2013-07-06 23:38:08 +0200 (Sat, 06 Jul 2013) | 2 lines Removed unused variable. ------------------------------------------------------------------------ r20770 | AxelBrandenburg | 2013-07-06 14:54:59 +0200 (Sat, 06 Jul 2013) | 1 line added Lorentz force from cosmic rays ------------------------------------------------------------------------ r20769 | AxelBrandenburg | 2013-07-05 18:06:33 +0200 (Fri, 05 Jul 2013) | 1 line added two experimental routines for cosmic ray current evolution ------------------------------------------------------------------------ r20768 | NBabkovskaia | 2013-07-05 12:17:18 +0200 (Fri, 05 Jul 2013) | 5 lines last version from norosx52 (after ldcore case) ------------------------------------------------------------------------ r20767 | NBabkovskaia | 2013-07-05 11:53:45 +0200 (Fri, 05 Jul 2013) | 3 lines lats version from sisu ------------------------------------------------------------------------ r20765 | ccyang@astro.lu.se | 2013-07-04 15:03:29 +0200 (Thu, 04 Jul 2013) | 3 lines Time-step constraint should also include curvilinear and irregular grids. ------------------------------------------------------------------------ r20760 | AxelBrandenburg | 2013-07-04 11:10:06 +0200 (Thu, 04 Jul 2013) | 2 lines added cooling profile -f(z)/tau * rho * (cs2-cs20), without dividing by cs20; dimensions are already correct like this. ------------------------------------------------------------------------ r20758 | wladimir.lyra | 2013-07-04 04:48:55 +0200 (Thu, 04 Jul 2013) | 4 lines D'oh! Out of box is (ineargrid(k,[123])>=[lmn]2-1, not (ineargrid(k,1)<=[lmn]2-1 ------------------------------------------------------------------------ r20756 | wladimir.lyra | 2013-07-04 02:21:22 +0200 (Thu, 04 Jul 2013) | 2 lines fix indentation ------------------------------------------------------------------------ r20755 | wladimir.lyra | 2013-07-04 02:19:56 +0200 (Thu, 04 Jul 2013) | 5 lines Exclude the now sorted nbody particles from getting self-gravity added to them. Should fix the auto-test. ------------------------------------------------------------------------ r20752 | ccyang@astro.lu.se | 2013-07-03 18:22:11 +0200 (Wed, 03 Jul 2013) | 3 lines Modularize the calculation of pencil geometry in Equ to Grid. ------------------------------------------------------------------------ r20751 | ccyang@astro.lu.se | 2013-07-03 14:35:48 +0200 (Wed, 03 Jul 2013) | 3 lines Comments. ------------------------------------------------------------------------ r20748 | wladimir.lyra | 2013-07-03 10:42:32 +0200 (Wed, 03 Jul 2013) | 4 lines Fix indentation. ------------------------------------------------------------------------ r20747 | wladimir.lyra | 2013-07-03 10:40:51 +0200 (Wed, 03 Jul 2013) | 6 lines Fix the fix for nbody particles out of the box. The nbody particles can (and should) be sorted with the dust particles. The fix needed was to define the nearest grid point as the closest physical point in that case. ------------------------------------------------------------------------ r20746 | AxelBrandenburg | 2013-07-02 20:48:34 +0200 (Tue, 02 Jul 2013) | 1 line added vertical NEMPI effect ------------------------------------------------------------------------ r20745 | ccyang@astro.lu.se | 2013-07-02 18:33:04 +0200 (Tue, 02 Jul 2013) | 4 lines 1. Restructure the calculation of eta * jj. 2. Add shock resistivity. ------------------------------------------------------------------------ r20744 | AxelBrandenburg | 2013-07-02 08:45:22 +0200 (Tue, 02 Jul 2013) | 34 lines In eos_idealgas.f90, deleted bc_ss_flux_orig, bc_ss_flux_tmp, bc_ss_flux_tmp2. The old comments say: In r10476 (10-mar-09), bc_ss_flux_tmp was produced by copying. check-in message: "added radiative boundary condition" In r10485 (11-mar-09), bc_ss_flux_tmp2 was produced by copying. check-in message: "prelim. changes for top b.c." In r10959 (26-may-09), bc_ss_flux was produced by copying. check-in message: "corrected bc_ss_flux if c1 condition is used for the top The old bc_ss_flux exists still as bc_ss_flux_tmp2 (for the time being)" eos_idealgas.f90 magnetically quenched boundary condition etc radiation_ray.f90 enhanced one comment about optically thick magnetic/meanfield.f90 added lturb_temp_diff (turbulent diffusion with temperature gradient) magnetic/meanfield.h shared_variables.f90 added get_variable_char0d entropy.f90 now use cp instead the earlier 1/cp1 when cp didn't exist. magnetic.h pert_aa was outcommented and is now removed. ------------------------------------------------------------------------ r20742 | ccyang@astro.lu.se | 2013-07-01 18:17:20 +0200 (Mon, 01 Jul 2013) | 3 lines Add constant resistivity. ------------------------------------------------------------------------ r20740 | kdittrich85@gmail.com | 2013-07-01 16:18:41 +0200 (Mon, 01 Jul 2013) | 3 lines [particles] added constant gravity field in particles_dust_blocks.f90 ------------------------------------------------------------------------ r20737 | ccyang@astro.lu.se | 2013-06-29 20:51:32 +0200 (Sat, 29 Jun 2013) | 4 lines Fix a runtime and compiler-/system-dependent bug when assigning an array section to another that is overlapping in memory. ------------------------------------------------------------------------ r20733 | ccyang@astro.lu.se | 2013-06-28 17:33:34 +0200 (Fri, 28 Jun 2013) | 3 lines Fix the override to r20651 by r20716. ------------------------------------------------------------------------ r20731 | ccyang@astro.lu.se | 2013-06-28 16:54:31 +0200 (Fri, 28 Jun 2013) | 3 lines Comments. ------------------------------------------------------------------------ r20725 | wladimir.lyra | 2013-06-28 10:41:23 +0200 (Fri, 28 Jun 2013) | 2 lines still indentation ------------------------------------------------------------------------ r20724 | wladimir.lyra | 2013-06-28 10:37:12 +0200 (Fri, 28 Jun 2013) | 2 lines fix indentation ------------------------------------------------------------------------ r20723 | wladimir.lyra | 2013-06-28 10:30:32 +0200 (Fri, 28 Jun 2013) | 4 lines Add possibility of not doing particle sorting (which remains true by default). ------------------------------------------------------------------------ r20722 | mreinhardt@nordita.org | 2013-06-28 05:26:17 +0200 (Fri, 28 Jun 2013) | 2 lines MR: suppresed testfield_general for the moment ------------------------------------------------------------------------ r20721 | mreinhardt@nordita.org | 2013-06-28 05:20:18 +0200 (Fri, 28 Jun 2013) | 3 lines MR: added mising declarations ------------------------------------------------------------------------ r20720 | mreinhardt@nordita.org | 2013-06-28 05:18:00 +0200 (Fri, 28 Jun 2013) | 2 lines MR: added missing declarations ------------------------------------------------------------------------ r20719 | AxelBrandenburg | 2013-06-28 04:39:48 +0200 (Fri, 28 Jun 2013) | 3 lines TESTFIELD_GENERAL = notestfield helps for now. ------------------------------------------------------------------------ r20718 | mreinhardt@nordita.org | 2013-06-28 04:16:50 +0200 (Fri, 28 Jun 2013) | 2 lines MR: fixed typos ------------------------------------------------------------------------ r20717 | mreinhardt@nordita.org | 2013-06-28 04:05:01 +0200 (Fri, 28 Jun 2013) | 2 lines MR: revert because of auto-test breech ------------------------------------------------------------------------ r20716 | mreinhardt@nordita.org | 2013-06-28 00:46:18 +0200 (Fri, 28 Jun 2013) | 2 lines MR: changes for use of testfield_general ------------------------------------------------------------------------ r20715 | mreinhardt@nordita.org | 2013-06-28 00:29:43 +0200 (Fri, 28 Jun 2013) | 2 lines MR: dependencies for use of testfield_general introduced ------------------------------------------------------------------------ r20714 | mreinhardt@nordita.org | 2013-06-28 00:26:49 +0200 (Fri, 28 Jun 2013) | 3 lines MR: modified to work with testfield_general; exemplified use of alias names (equivalence) for selected diagnostics ------------------------------------------------------------------------ r20713 | mreinhardt@nordita.org | 2013-06-28 00:24:52 +0200 (Fri, 28 Jun 2013) | 2 lines MR: inserted uumxz, lcalc_uumeanxz as public ------------------------------------------------------------------------ r20710 | mreinhardt@nordita.org | 2013-06-27 20:12:48 +0200 (Thu, 27 Jun 2013) | 2 lines MR: created to centralize functionalities of testfield modules; works at the moment only with testfield_xz. ------------------------------------------------------------------------ r20709 | dhruba.mitra | 2013-06-27 17:16:34 +0200 (Thu, 27 Jun 2013) | 2 lines Added 'none' to nnewton_type ------------------------------------------------------------------------ r20708 | ccyang@astro.lu.se | 2013-06-27 16:55:02 +0200 (Thu, 27 Jun 2013) | 3 lines Restructure the calculation of the E field. ------------------------------------------------------------------------ r20707 | joern.warnecke | 2013-06-27 14:02:04 +0200 (Thu, 27 Jun 2013) | 2 lines [boundary] fixed spr boundary condition ------------------------------------------------------------------------ r20706 | ccyang@astro.lu.se | 2013-06-26 23:24:31 +0200 (Wed, 26 Jun 2013) | 3 lines Correct the unit for the current density. ------------------------------------------------------------------------ r20705 | ccyang@astro.lu.se | 2013-06-26 15:55:02 +0200 (Wed, 26 Jun 2013) | 3 lines Prototype for directly evolving the magnetic field. ------------------------------------------------------------------------ r20704 | ccyang@astro.lu.se | 2013-06-26 15:27:29 +0200 (Wed, 26 Jun 2013) | 3 lines Initialize the runtime parameter nnewton_type. ------------------------------------------------------------------------ r20701 | sven.bingert | 2013-06-25 09:37:22 +0200 (Tue, 25 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20699 | dhruba.mitra | 2013-06-24 23:33:51 +0200 (Mon, 24 Jun 2013) | 16 lines This checkin unfortunately contains two set of changes. (A) to introduce non-newtonian fluids. The changes are, hydro: calculate pencil deluidxjk sub : subroutine to calculate del2fi_dxjk viscosity: non-newtonian viscosity deriv : del_ij calculates nothing if i.ne.j but if I put a fatal_error then lots of samples crashes. So I have put a comment. (B) to introduce calculation of linearized operator. hydro: introduce logical variable llinearized_hydro If this is true, then a new auxiliary vector variable iuu0 is introduced. The the linearized nonlinear term in Navier--Stokes in calculated. For this purpose, the calc_pencil_hydro now calls two different subroutines depending on whether the llinearized_hydro is true or false. The same model can be used in all ther other modules (e.g., magnetic) to calculate the linearized operator. ------------------------------------------------------------------------ r20698 | dhruba.mitra | 2013-06-24 23:25:51 +0200 (Mon, 24 Jun 2013) | 2 lines Beginning of a subroutine that lists the particles close to a processor boundary. ------------------------------------------------------------------------ r20686 | sven.bingert | 2013-06-24 18:20:47 +0200 (Mon, 24 Jun 2013) | 1 line removed unused routine ------------------------------------------------------------------------ r20685 | sven.bingert | 2013-06-24 18:19:51 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20684 | sven.bingert | 2013-06-24 18:18:31 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20683 | sven.bingert | 2013-06-24 18:16:51 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] ------------------------------------------------------------------------ r20682 | sven.bingert | 2013-06-24 18:16:23 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] ------------------------------------------------------------------------ r20681 | sven.bingert | 2013-06-24 18:15:04 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] ------------------------------------------------------------------------ r20680 | sven.bingert | 2013-06-24 18:14:31 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] does NOT compile ------------------------------------------------------------------------ r20679 | sven.bingert | 2013-06-24 18:12:02 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] does NOT compile ------------------------------------------------------------------------ r20678 | sven.bingert | 2013-06-24 18:10:27 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20677 | sven.bingert | 2013-06-24 18:08:57 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style, bug fixed] does NOT compile ------------------------------------------------------------------------ r20676 | sven.bingert | 2013-06-24 18:05:10 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] does NOT compile ------------------------------------------------------------------------ r20675 | sven.bingert | 2013-06-24 18:02:53 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] ------------------------------------------------------------------------ r20674 | sven.bingert | 2013-06-24 18:02:25 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20673 | sven.bingert | 2013-06-24 18:01:06 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20672 | sven.bingert | 2013-06-24 17:59:33 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20671 | sven.bingert | 2013-06-24 17:57:56 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20670 | sven.bingert | 2013-06-24 17:55:48 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] does NOT compile ------------------------------------------------------------------------ r20669 | sven.bingert | 2013-06-24 17:51:56 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] still some warnings ------------------------------------------------------------------------ r20668 | sven.bingert | 2013-06-24 17:41:52 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20667 | sven.bingert | 2013-06-24 17:39:27 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] does NOT compile because function is missing. Should be moved to experimental or obsolete ------------------------------------------------------------------------ r20665 | sven.bingert | 2013-06-24 17:35:12 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style, bug fixed] still lots of warnings ------------------------------------------------------------------------ r20664 | sven.bingert | 2013-06-24 17:33:18 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style, bug fixed] still lots of warnings ------------------------------------------------------------------------ r20663 | sven.bingert | 2013-06-24 17:31:32 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style, bug fixed] still lots of warnings ------------------------------------------------------------------------ r20662 | sven.bingert | 2013-06-24 17:24:27 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] removed warning ------------------------------------------------------------------------ r20661 | sven.bingert | 2013-06-24 17:22:08 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] removed warning ------------------------------------------------------------------------ r20660 | sven.bingert | 2013-06-24 17:18:51 +0200 (Mon, 24 Jun 2013) | 1 line [coding style] removed warning ------------------------------------------------------------------------ r20658 | sven.bingert | 2013-06-24 17:16:09 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20657 | sven.bingert | 2013-06-24 17:13:14 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style] ------------------------------------------------------------------------ r20655 | ccyang@astro.lu.se | 2013-06-24 17:11:07 +0200 (Mon, 24 Jun 2013) | 3 lines Fix the dependency of Magnetic on InitialCondition. ------------------------------------------------------------------------ r20653 | sven.bingert | 2013-06-24 17:10:16 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] lots of warnings and doesn't compile in standart fortran 90 ------------------------------------------------------------------------ r20652 | sven.bingert | 2013-06-24 17:06:18 +0200 (Mon, 24 Jun 2013) | 1 line [renaming, coding style, bug fixed ] still lots of warnings ------------------------------------------------------------------------ r20651 | ccyang@astro.lu.se | 2013-06-24 17:04:58 +0200 (Mon, 24 Jun 2013) | 3 lines Fix the dependency on the magnetic library. ------------------------------------------------------------------------ r20650 | sven.bingert | 2013-06-24 17:02:39 +0200 (Mon, 24 Jun 2013) | 1 line [coding style] removed warnings ------------------------------------------------------------------------ r20648 | sven.bingert | 2013-06-24 16:56:25 +0200 (Mon, 24 Jun 2013) | 1 line [renaming and coding style] special_calc_entropy -> special_calc_energy ------------------------------------------------------------------------ r20647 | sven.bingert | 2013-06-24 16:52:27 +0200 (Mon, 24 Jun 2013) | 1 line [coding style] ------------------------------------------------------------------------ r20646 | sven.bingert | 2013-06-24 16:49:41 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] special_calc_entropy -> special_calc_energy ------------------------------------------------------------------------ r20644 | sven.bingert | 2013-06-24 16:27:23 +0200 (Mon, 24 Jun 2013) | 1 line [coding style] ------------------------------------------------------------------------ r20643 | sven.bingert | 2013-06-24 16:26:08 +0200 (Mon, 24 Jun 2013) | 1 line [renaming and cleanup] special_calc_entropy -> special_calc_energy ------------------------------------------------------------------------ r20642 | sven.bingert | 2013-06-24 16:25:14 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] special_calc_entropy -> special_calc_energy ------------------------------------------------------------------------ r20641 | sven.bingert | 2013-06-24 16:24:46 +0200 (Mon, 24 Jun 2013) | 1 line [renaming] special_calc_entropy -> special_calc_energy ------------------------------------------------------------------------ r20630 | Bourdin.KIS | 2013-06-24 00:18:44 +0200 (Mon, 24 Jun 2013) | 2 lines Added different tags for sending and receiving. ------------------------------------------------------------------------ r20618 | AxelBrandenburg | 2013-06-23 08:28:40 +0200 (Sun, 23 Jun 2013) | 12 lines some fixes to be able to (i) change mesh later during run, and to shift origin the other way around (used for circular polarized wave). +! If we decided to use a new grid, we need to overwrite the data +! that we just read in from var.dat. (Note that grid information +! was also used above, so we really need to do it twice then.) added lshift_origin_lower +! Shift the lower boundary if requested, but only for periodic directions. +! Contrary to the upper case (lshift_origin) ------------------------------------------------------------------------ r20616 | Bourdin.KIS | 2013-06-23 01:12:25 +0200 (Sun, 23 Jun 2013) | 2 lines Implemented new fully parallel with O(sqrt(nprocxy)) communication scheme in 'transp_pencil_xy' as a proof of concept. This will later be implemented in all transpose routines, where applicable. ------------------------------------------------------------------------ r20609 | Bourdin.KIS | 2013-06-22 08:14:32 +0200 (Sat, 22 Jun 2013) | 2 lines Coding style. ------------------------------------------------------------------------ r20608 | Bourdin.KIS | 2013-06-22 07:49:38 +0200 (Sat, 22 Jun 2013) | 2 lines Sorry for the mess, here is now the correct version. ------------------------------------------------------------------------ r20607 | sven.bingert | 2013-06-21 20:27:41 +0200 (Fri, 21 Jun 2013) | 1 line wrong intent of n in coun_bits and superfluous variable ------------------------------------------------------------------------ r20606 | sven.bingert | 2013-06-21 20:26:30 +0200 (Fri, 21 Jun 2013) | 1 line fixed auto-test, the return value is asigned to a variable with the name of the function ------------------------------------------------------------------------ r20605 | Bourdin.KIS | 2013-06-21 16:29:50 +0200 (Fri, 21 Jun 2013) | 2 lines Fixed typo, fixes autotests. ------------------------------------------------------------------------ r20604 | Bourdin.KIS | 2013-06-21 10:08:50 +0200 (Fri, 21 Jun 2013) | 2 lines Coding style. ------------------------------------------------------------------------ r20603 | Bourdin.KIS | 2013-06-21 10:04:17 +0200 (Fri, 21 Jun 2013) | 2 lines Added a routine to get the number of the left-most non-zero bit of an integer. (Need this for the new optimized transpose routines.) ------------------------------------------------------------------------ r20588 | wladimir.lyra | 2013-06-20 12:06:02 +0200 (Thu, 20 Jun 2013) | 4 lines Initial condition file for the Kelvin-Helmholtz run of McNally, Lyra & Passy 2011. ------------------------------------------------------------------------ r20587 | dhruba.mitra | 2013-06-20 10:36:57 +0200 (Thu, 20 Jun 2013) | 2 lines Added lmigration_redo to namelist of particles_charged. ------------------------------------------------------------------------ r20580 | anders@astro.lu.se | 2013-06-19 16:03:49 +0200 (Wed, 19 Jun 2013) | 2 lines Moved around some subs so that rprint appears in the end. ------------------------------------------------------------------------ r20579 | anders@astro.lu.se | 2013-06-19 16:01:49 +0200 (Wed, 19 Jun 2013) | 5 lines Implemented detection of entropy related settings in Makefile.local and in the .in files. The Makefile will look for ENTROPY in Makefile.local and for &entropy_ in start.in and run.in and suggest a regular expression to replace these by copy paste. COMMENTED OUT FOR NOW. ------------------------------------------------------------------------ r20578 | kdittrich85 | 2013-06-19 09:46:27 +0200 (Wed, 19 Jun 2013) | 2 lines Hard wall boundary conditions for particles ------------------------------------------------------------------------ r20576 | sven.bingert | 2013-06-18 22:25:51 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20575 | sven.bingert | 2013-06-18 22:17:29 +0200 (Tue, 18 Jun 2013) | 1 line dss_dt -> denergy_dt and init_ss -> init_energy ------------------------------------------------------------------------ r20574 | sven.bingert | 2013-06-18 22:14:20 +0200 (Tue, 18 Jun 2013) | 1 line fixed comment ------------------------------------------------------------------------ r20573 | sven.bingert | 2013-06-18 22:10:36 +0200 (Tue, 18 Jun 2013) | 1 line fixed comment ------------------------------------------------------------------------ r20572 | sven.bingert | 2013-06-18 22:08:21 +0200 (Tue, 18 Jun 2013) | 1 line removed obsolete file used for debugging ------------------------------------------------------------------------ r20571 | sven.bingert | 2013-06-18 22:06:55 +0200 (Tue, 18 Jun 2013) | 1 line removed obsolete file used for debugging ------------------------------------------------------------------------ r20570 | sven.bingert | 2013-06-18 21:49:36 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy; it is the testmodule for the new conductivity module ------------------------------------------------------------------------ r20569 | sven.bingert | 2013-06-18 21:26:48 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20568 | boris.dintrans | 2013-06-18 21:25:37 +0200 (Tue, 18 Jun 2013) | 5 lines Also moved everything from *_entropy to *_energy (as Sven did just before with temperature_idealgas) ------------------------------------------------------------------------ r20567 | sven.bingert | 2013-06-18 21:23:06 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20566 | sven.bingert | 2013-06-18 21:18:57 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20565 | boris.dintrans | 2013-06-18 21:15:33 +0200 (Tue, 18 Jun 2013) | 1 line rm double register_energy ------------------------------------------------------------------------ r20564 | sven.bingert | 2013-06-18 21:12:20 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy, nomodules is back working ------------------------------------------------------------------------ r20563 | sven.bingert | 2013-06-18 21:06:13 +0200 (Tue, 18 Jun 2013) | 1 line minor ------------------------------------------------------------------------ r20562 | sven.bingert | 2013-06-18 21:05:45 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20561 | sven.bingert | 2013-06-18 21:04:21 +0200 (Tue, 18 Jun 2013) | 1 line entropy -> energy ------------------------------------------------------------------------ r20560 | sven.bingert | 2013-06-18 20:53:43 +0200 (Tue, 18 Jun 2013) | 1 line mv file ------------------------------------------------------------------------ r20559 | sven.bingert | 2013-06-18 20:52:59 +0200 (Tue, 18 Jun 2013) | 1 line mv file ------------------------------------------------------------------------ r20558 | sven.bingert | 2013-06-18 20:29:12 +0200 (Tue, 18 Jun 2013) | 1 line fixed type ------------------------------------------------------------------------ r20557 | sven.bingert | 2013-06-18 17:24:46 +0200 (Tue, 18 Jun 2013) | 1 line removed duplicated line ------------------------------------------------------------------------ r20556 | wladimir.lyra | 2013-06-18 17:23:35 +0200 (Tue, 18 Jun 2013) | 6 lines Change entropy to energy. Also add hack to make code find the entropy file if ENTROPY is defined in Makefile.local, for backward compatibility. ------------------------------------------------------------------------ r20555 | sven.bingert | 2013-06-18 17:11:58 +0200 (Tue, 18 Jun 2013) | 1 line edit comment ------------------------------------------------------------------------ r20554 | sven.bingert | 2013-06-18 17:11:42 +0200 (Tue, 18 Jun 2013) | 1 line edit comment ------------------------------------------------------------------------ r20553 | sven.bingert | 2013-06-18 17:11:23 +0200 (Tue, 18 Jun 2013) | 1 line edit comment ------------------------------------------------------------------------ r20552 | sven.bingert | 2013-06-18 17:11:07 +0200 (Tue, 18 Jun 2013) | 1 line edit comment ------------------------------------------------------------------------ r20551 | sven.bingert | 2013-06-18 17:09:54 +0200 (Tue, 18 Jun 2013) | 1 line changed from use entropy to use energy ------------------------------------------------------------------------ r20550 | wladimir.lyra | 2013-06-18 17:08:47 +0200 (Tue, 18 Jun 2013) | 2 lines removed dynamical thermal diffusion ------------------------------------------------------------------------ r20549 | wladimir.lyra | 2013-06-18 17:07:40 +0200 (Tue, 18 Jun 2013) | 2 lines Changed module entropy to module energy. ------------------------------------------------------------------------ r20548 | anders@astro.lu.se | 2013-06-18 16:53:30 +0200 (Tue, 18 Jun 2013) | 2 lines Removed fill_farray_pressure. ------------------------------------------------------------------------ r20547 | wladimir.lyra | 2013-06-18 16:53:16 +0200 (Tue, 18 Jun 2013) | 4 lines Fix keep_compiler_quiet typo ------------------------------------------------------------------------ r20546 | wladimir.lyra | 2013-06-18 16:52:38 +0200 (Tue, 18 Jun 2013) | 2 lines rename fill_array_pressure ------------------------------------------------------------------------ r20545 | wladimir.lyra | 2013-06-18 16:52:10 +0200 (Tue, 18 Jun 2013) | 2 lines add calc_special_energy ------------------------------------------------------------------------ r20543 | wladimir.lyra | 2013-06-18 16:33:08 +0200 (Tue, 18 Jun 2013) | 2 lines Compiling version of energy + conductivity. ------------------------------------------------------------------------ r20542 | wladimir.lyra | 2013-06-18 16:32:38 +0200 (Tue, 18 Jun 2013) | 2 lines resolve conflicted state of Makefile.depend wrt energy ------------------------------------------------------------------------ r20541 | ccyang@astro.lu.se | 2013-06-18 16:24:09 +0200 (Tue, 18 Jun 2013) | 3 lines Remove dynamical_thermal_diffusion, which should be in conductivity.f90. ------------------------------------------------------------------------ r20540 | anders@astro.lu.se | 2013-06-18 16:18:21 +0200 (Tue, 18 Jun 2013) | 2 lines impose_energy_floor -> impose_entropy_floor ------------------------------------------------------------------------ r20539 | anders@astro.lu.se | 2013-06-18 16:17:40 +0200 (Tue, 18 Jun 2013) | 2 lines impose_energy_floor -> impose_entropy_floor ------------------------------------------------------------------------ r20538 | anders@astro.lu.se | 2013-06-18 16:11:16 +0200 (Tue, 18 Jun 2013) | 2 lines Fixed a few bugs in noenergy. ------------------------------------------------------------------------ r20537 | sven.bingert | 2013-06-18 16:08:38 +0200 (Tue, 18 Jun 2013) | 1 line removed dublicate declaration ------------------------------------------------------------------------ r20536 | anders@astro.lu.se | 2013-06-18 16:06:30 +0200 (Tue, 18 Jun 2013) | 2 lines Commented out parameters for cparam.inc so that they do not appear twice. ------------------------------------------------------------------------ r20535 | ccyang@astro.lu.se | 2013-06-18 16:04:33 +0200 (Tue, 18 Jun 2013) | 3 lines Add dummy module for energy equation. ------------------------------------------------------------------------ r20534 | anders@astro.lu.se | 2013-06-18 16:00:10 +0200 (Tue, 18 Jun 2013) | 2 lines entropy -> energy ------------------------------------------------------------------------ r20533 | anders@astro.lu.se | 2013-06-18 15:57:10 +0200 (Tue, 18 Jun 2013) | 2 lines ss -> ee ------------------------------------------------------------------------ r20532 | sven.bingert | 2013-06-18 15:55:19 +0200 (Tue, 18 Jun 2013) | 1 line added some dependencies for energy and conductivity ------------------------------------------------------------------------ r20531 | anders@astro.lu.se | 2013-06-18 15:54:41 +0200 (Tue, 18 Jun 2013) | 2 lines Include energy.h. ------------------------------------------------------------------------ r20530 | wladimir.lyra | 2013-06-18 15:53:50 +0200 (Tue, 18 Jun 2013) | 4 lines Add missing _OBJ to list in $physics ------------------------------------------------------------------------ r20529 | ccyang@astro.lu.se | 2013-06-18 15:42:25 +0200 (Tue, 18 Jun 2013) | 3 lines Add dummy module for conductivity. ------------------------------------------------------------------------ r20528 | anders@astro.lu.se | 2013-06-18 15:38:15 +0200 (Tue, 18 Jun 2013) | 2 lines Added header for energy. ------------------------------------------------------------------------ r20527 | wladimir.lyra | 2013-06-18 15:23:30 +0200 (Tue, 18 Jun 2013) | 2 lines add experimental/conductivity.h ------------------------------------------------------------------------ r20526 | anders@astro.lu.se | 2013-06-18 14:50:26 +0200 (Tue, 18 Jun 2013) | 2 lines Turn into energy module. ------------------------------------------------------------------------ r20525 | anders@astro.lu.se | 2013-06-18 14:50:00 +0200 (Tue, 18 Jun 2013) | 2 lines Commented out some stuff that does not work, but still does not work. ------------------------------------------------------------------------ r20524 | anders@astro.lu.se | 2013-06-18 14:49:13 +0200 (Tue, 18 Jun 2013) | 2 lines Added architecture for energy module and conductivity module. ------------------------------------------------------------------------ r20522 | anders@astro.lu.se | 2013-06-18 13:41:43 +0200 (Tue, 18 Jun 2013) | 2 lines Added some calls to putting and getting shared variables. ------------------------------------------------------------------------ r20521 | anders@astro.lu.se | 2013-06-18 13:38:41 +0200 (Tue, 18 Jun 2013) | 2 lines Updated to work with latest version of the code. ------------------------------------------------------------------------ r20520 | wladimir.lyra | 2013-06-18 13:24:43 +0200 (Tue, 18 Jun 2013) | 2 lines include file for conductivity ------------------------------------------------------------------------ r20519 | wladimir.lyra | 2013-06-18 13:21:12 +0200 (Tue, 18 Jun 2013) | 4 lines Move to experimental, and check in minor updates. ------------------------------------------------------------------------ r20518 | sven.bingert | 2013-06-18 13:14:58 +0200 (Tue, 18 Jun 2013) | 1 line removed superfluous variables ------------------------------------------------------------------------ r20517 | wladimir.lyra | 2013-06-18 13:10:59 +0200 (Tue, 18 Jun 2013) | 4 lines Alpha version of conductivity module. ------------------------------------------------------------------------ r20516 | sven.bingert | 2013-06-18 12:44:02 +0200 (Tue, 18 Jun 2013) | 1 line commented out in order to reduce the compiler warnings ------------------------------------------------------------------------ r20515 | sven.bingert | 2013-06-18 12:05:33 +0200 (Tue, 18 Jun 2013) | 1 line removed compiler warnings and trailing whitespaces ------------------------------------------------------------------------ r20514 | sven.bingert | 2013-06-18 11:30:17 +0200 (Tue, 18 Jun 2013) | 1 line removed tab character and trailing white spaces ------------------------------------------------------------------------ r20513 | sven.bingert | 2013-06-18 11:29:24 +0200 (Tue, 18 Jun 2013) | 1 line removed tab character and trailing white spaces ------------------------------------------------------------------------ r20511 | sven.bingert | 2013-06-18 10:54:35 +0200 (Tue, 18 Jun 2013) | 1 line removed superfluous variables ------------------------------------------------------------------------ r20510 | mreinhardt@nordita.org | 2013-06-18 10:07:31 +0200 (Tue, 18 Jun 2013) | 3 lines MR: calls to dipole_tor and dipole added ------------------------------------------------------------------------ r20509 | sven.bingert | 2013-06-18 10:03:19 +0200 (Tue, 18 Jun 2013) | 1 line removed old debug lines ------------------------------------------------------------------------ r20508 | sven.bingert | 2013-06-18 10:01:49 +0200 (Tue, 18 Jun 2013) | 1 line removed unnecessary mpibarrier calls ------------------------------------------------------------------------ r20507 | AxelBrandenburg | 2013-06-18 07:40:57 +0200 (Tue, 18 Jun 2013) | 3 lines updated comments about upwinding, nonequidistant grids, and non-Cartesian grids. Please check that it is correct. ------------------------------------------------------------------------ r20506 | AxelBrandenburg | 2013-06-18 07:38:38 +0200 (Tue, 18 Jun 2013) | 2 lines moved magnetic_axisym.f90 to obsolete (was never really finished or working). ------------------------------------------------------------------------ r20505 | AxelBrandenburg | 2013-06-18 07:36:41 +0200 (Tue, 18 Jun 2013) | 2 lines modified comment to "b2 now (since 18 June 2013) includes B_ext by default." ------------------------------------------------------------------------ r20504 | AxelBrandenburg | 2013-06-18 07:35:29 +0200 (Tue, 18 Jun 2013) | 3 lines b2 now includes B_ext by default (otherwise use luse_Bext_in_b2). luse_Bext_in_b2=T is still kept for backwards compatibility. ------------------------------------------------------------------------ r20503 | mreinhardt@nordita.org | 2013-06-18 03:43:35 +0200 (Tue, 18 Jun 2013) | 3 lines MR: dipole_tor and dipole added ------------------------------------------------------------------------ r20474 | AxelBrandenburg | 2013-06-13 17:06:13 +0200 (Thu, 13 Jun 2013) | 2 lines option of symmetry of forcing function about z direction ------------------------------------------------------------------------ r20472 | AxelBrandenburg | 2013-06-11 09:56:48 +0200 (Tue, 11 Jun 2013) | 1 line changed now the default to lNEMPI_correction=.true. ------------------------------------------------------------------------ r20468 | dhruba.mitra | 2013-06-10 17:29:58 +0200 (Mon, 10 Jun 2013) | 2 lines inserted logical variable linsert_particles_continiously ------------------------------------------------------------------------ r20466 | dhruba.mitra | 2013-06-10 17:13:16 +0200 (Mon, 10 Jun 2013) | 3 lines particles potential: Now compiles and runs with interaction between particles. May not still work with particles parallelized over many processors. ------------------------------------------------------------------------ r20463 | AxelBrandenburg | 2013-06-09 07:59:51 +0200 (Sun, 09 Jun 2013) | 1 line fixed auto test for 1d-tests/sedimentation-noneq-blocks ------------------------------------------------------------------------ r20462 | dhruba.mitra | 2013-06-08 09:27:26 +0200 (Sat, 08 Jun 2013) | 23 lines Changes to solve for charged particles in an MHD dynamo. The particles do not have drag. For them we solve the equations, dv/dt = q/m(E + vXB), where the electric field, E = -dA/dt and B is the magnetic field. A sample in the samples directory: ChargedParticle_in_MHDturb is going to be checked in after this check in. However, all these works now only for periodic boundary condition on E and B which are stored as auxiliary variables. boundcond: added subroutine set_periodic_boundary_on_aux particles_dust : dummy routine periodic_boundary_on_aux particles.h : public entry of the same cdata : iEE to iEEz for electric field magnetic : MAJOR CHANGES : added a 1-d array (same size and pencils) called dAdt which stores all the changes to df(.,.,.,iax:iaz). Before the mean-field contributios are added this array is then added to df(... ) and also (with negative sign) stored into auxiliary array f(.,.,.,iEEx:iEEz) (if asked) particles_cdata: additional variables for interpolation of E and B particles_tracer : dummy routine periodic_boundary_on_aux particles_main : added comments in rhop_swarm etc, also call to periodic_boundary_on_aux from before_boundary hook particles_dust_block : dummy routine periodic_boundary_on_aux particles_charged: new module that solves for charged particles. Experimental. ------------------------------------------------------------------------ r20459 | mreinhardt@nordita.org | 2013-06-06 04:02:03 +0200 (Thu, 06 Jun 2013) | 3 lines MR: second-order-in-time fake test equations corrected: updating of df must always be recursive for higher order time integration; alternative formulation added ------------------------------------------------------------------------ r20457 | AxelBrandenburg | 2013-06-05 19:42:52 +0200 (Wed, 05 Jun 2013) | 1 line corrected modification for 2nd order time derivative ------------------------------------------------------------------------ r20456 | mreinhardt@nordita.org | 2013-06-05 18:12:12 +0200 (Wed, 05 Jun 2013) | 2 lines MR: modification for stabilization of testproblems ------------------------------------------------------------------------ r20455 | AxelBrandenburg | 2013-06-05 15:14:15 +0200 (Wed, 05 Jun 2013) | 1 line allowed for surface_z being positioned at z=r_ff rather than 0, and allowed this now also for irrotational forcing ------------------------------------------------------------------------ r20454 | anders@astro.lu.se | 2013-06-05 14:01:53 +0200 (Wed, 05 Jun 2013) | 3 lines For variable gas density drag law, get gas density from fb instead of f (Anders + Daniel C). ------------------------------------------------------------------------ r20451 | joern.warnecke | 2013-06-03 22:56:55 +0200 (Mon, 03 Jun 2013) | 2 lines fixed spt, by reverting and changed some of Axels changes ------------------------------------------------------------------------ r20449 | AxelBrandenburg | 2013-06-02 17:08:14 +0200 (Sun, 02 Jun 2013) | 1 line Time-dependent, nearly symmetric flow added ------------------------------------------------------------------------ r20446 | AxelBrandenburg | 2013-06-01 21:44:49 +0200 (Sat, 01 Jun 2013) | 9 lines Joern, please check, this caused a problem with several auto-tests - tmp=cotth(m1)/dx_1(m1) + tmp=cotth(m1)*dx_1 - tmp=cotth(m2)/dx_1(m2) + tmp=cotth(m2)*dx_1